RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.54□□□□□ -2
RNF111-211ENST00000560952 RHPN2Q8IUC4 686 aa2.54□□□□□ -2
RNF111-211ENST00000560952 LINC00346Q8IVM7 164 aa2.54□□□□□ -2
RNF111-211ENST00000560952 CDKL3Q8IVW4 592 aaPredicted RBP2.54□□□□□ -2
RNF111-211ENST00000560952 C1orf210Q8IVY1 113 aa2.54□□□□□ -2
RNF111-211ENST00000560952 MAPKAPK5Q8IW41 473 aa2.54□□□□□ -2
RNF111-211ENST00000560952 ZNF679Q8IYX0 411 aa2.54□□□□□ -2
RNF111-211ENST00000560952 RASGEF1CQ8N431 466 aa2.54□□□□□ -2
RNF111-211ENST00000560952 TDRD5Q8NAT2 981 aaKnown RBP2.54□□□□□ -2
RNF111-211ENST00000560952 MCPH1Q8NEM0 835 aa2.54□□□□□ -2
RNF111-211ENST00000560952 STYXQ8WUJ0 223 aa2.54□□□□□ -2
RNF111-211ENST00000560952 AFG1LQ8WV93 481 aa2.54□□□□□ -2
RNF111-211ENST00000560952 KCNE4Q8WWG9 221 aa2.54□□□□□ -2
RNF111-211ENST00000560952 LIPHQ8WWY8 451 aa2.54□□□□□ -2
RNF111-211ENST00000560952 MRPS27Q92552 414 aaKnown RBP2.54□□□□□ -2
RNF111-211ENST00000560952 TANKQ92844 425 aa2.54□□□□□ -2
RNF111-211ENST00000560952 SLC5A5Q92911 643 aa2.54□□□□□ -2
RNF111-211ENST00000560952 KIAA1143Q96AT1 154 aaPredicted RBP2.54□□□□□ -2
RNF111-211ENST00000560952 RMDN1Q96DB5 314 aa2.54□□□□□ -2
RNF111-211ENST00000560952 PHF21BQ96EK2 531 aa2.54□□□□□ -2
RNF111-211ENST00000560952 RNF125Q96EQ8 232 aa2.54□□□□□ -2
RNF111-211ENST00000560952 TMA16Q96EY4 203 aaKnown RBP2.54□□□□□ -2
RNF111-211ENST00000560952 HMCESQ96FZ2 354 aa2.54□□□□□ -2
RNF111-211ENST00000560952 ERO1AQ96HE7 468 aa2.54□□□□□ -2
RNF111-211ENST00000560952 CEP19Q96LK0 163 aa2.54□□□□□ -2
RNF111-211ENST00000560952 OR1F2PQ96R84 312 aa2.54□□□□□ -2
RNF111-211ENST00000560952 SF3B5Q9BWJ5 86 aaKnown RBP2.54□□□□□ -2
RNF111-211ENST00000560952 ZNF341Q9BYN7 854 aa2.54□□□□□ -2
RNF111-211ENST00000560952 NUF2Q9BZD4 464 aa2.54□□□□□ -2
RNF111-211ENST00000560952 DCLK3Q9C098 648 aa2.54□□□□□ -2
RNF111-211ENST00000560952 NDEL1Q9GZM8 345 aa2.54□□□□□ -2
RNF111-211ENST00000560952 SLC5A7Q9GZV3 580 aa2.54□□□□□ -2
RNF111-211ENST00000560952 SLC26A1Q9H2B4 701 aa2.54□□□□□ -2
RNF111-211ENST00000560952 BATF3Q9NR55 127 aa2.54□□□□□ -2
RNF111-211ENST00000560952 CENPMQ9NSP4 180 aa2.54□□□□□ -2
RNF111-211ENST00000560952 SIRT3Q9NTG7 399 aaPredicted RBP2.54□□□□□ -2
RNF111-211ENST00000560952 CCM2LQ9NUG4 571 aaPredicted RBP2.54□□□□□ -2
RNF111-211ENST00000560952 TMEM184CQ9NVA4 438 aa2.54□□□□□ -2
RNF111-211ENST00000560952 ARHGEF38Q9NXL2 777 aa2.54□□□□□ -2
RNF111-211ENST00000560952 TAS2R7Q9NYW3 318 aa2.54□□□□□ -2
RNF111-211ENST00000560952 PI4KBQ9UBF8 816 aa2.54□□□□□ -2
RNF111-211ENST00000560952 CRNNQ9UBG3 495 aaPredicted RBP2.54□□□□□ -2
RNF111-211ENST00000560952 ATP6V1HQ9UI12 483 aa2.54□□□□□ -2
RNF111-211ENST00000560952 DNAI1Q9UI46 699 aa2.54□□□□□ -2
RNF111-211ENST00000560952 SH3GLB1Q9Y371 365 aa2.54□□□□□ -2
RNF111-211ENST00000560952 MRPS2Q9Y399 296 aaKnown RBP2.54□□□□□ -2
RNF111-211ENST00000560952 GPR45Q9Y5Y3 372 aa2.54□□□□□ -2
RNF111-211ENST00000560952 CHD1O14646 1710 aa2.54□□□□□ -2
RNF111-211ENST00000560952 A0A1W2PQ09 198 aa2.53□□□□□ -2
RNF111-211ENST00000560952 MACROD2A1Z1Q3 448 aa2.53□□□□□ -2
RNF111-211ENST00000560952 HMX3A6NHT5 357 aa2.53□□□□□ -2
RNF111-211ENST00000560952 DNM1LO00429 736 aa2.53□□□□□ -2
RNF111-211ENST00000560952 TGM5O43548 720 aa2.53□□□□□ -2
RNF111-211ENST00000560952 DNAJB5O75953 348 aa2.53□□□□□ -2
RNF111-211ENST00000560952 MYO1DO94832 1006 aa2.53□□□□□ -2
RNF111-211ENST00000560952 TOX4O94842 621 aa2.53□□□□□ -2
RNF111-211ENST00000560952 MFN2O95140 757 aa2.53□□□□□ -2
RNF111-211ENST00000560952 PGLSO95336 258 aa2.53□□□□□ -2
RNF111-211ENST00000560952 PENKP01210 267 aaPredicted RBP2.53□□□□□ -2
RNF111-211ENST00000560952 IGHEP01854 428 aa2.53□□□□□ -2
RNF111-211ENST00000560952 SERPINF2P08697 491 aa2.53□□□□□ -2
RNF111-211ENST00000560952 KRT7P08729 469 aa2.53□□□□□ -2
RNF111-211ENST00000560952 CCDC166P0CW27 439 aa2.53□□□□□ -2
RNF111-211ENST00000560952 LAMP2P13473 410 aa2.53□□□□□ -2
RNF111-211ENST00000560952 MTHFD2P13995 350 aa2.53□□□□□ -2
RNF111-211ENST00000560952 GJA1P17302 382 aa2.53□□□□□ -2
RNF111-211ENST00000560952 C5AR1P21730 350 aa2.53□□□□□ -2
RNF111-211ENST00000560952 CPT2P23786 658 aa2.53□□□□□ -2
RNF111-211ENST00000560952 SLC7A1P30825 629 aa2.53□□□□□ -2
RNF111-211ENST00000560952 MCM7P33993 719 aa2.53□□□□□ -2
RNF111-211ENST00000560952 MDH1P40925 334 aaKnown RBP2.53□□□□□ -2
RNF111-211ENST00000560952 GARSP41250 739 aaKnown RBP2.53□□□□□ -2
RNF111-211ENST00000560952 PRKCIP41743 596 aa2.53□□□□□ -2
RNF111-211ENST00000560952 MAGEA1P43355 309 aa2.53□□□□□ -2
RNF111-211ENST00000560952 GABRB2P47870 512 aa2.53□□□□□ -2
RNF111-211ENST00000560952 AARSP49588 968 aaKnown RBP eCLIP2.53□□□□□ -2
RNF111-211ENST00000560952 AGFG1P52594 562 aaKnown RBP2.53□□□□□ -2
RNF111-211ENST00000560952 ANTXR2P58335 489 aa2.53□□□□□ -2
RNF111-211ENST00000560952 VAMP2P63027 116 aa2.53□□□□□ -2
RNF111-211ENST00000560952 S100A12P80511 92 aa2.53□□□□□ -2
RNF111-211ENST00000560952 PTH1RQ03431 593 aa2.53□□□□□ -2
RNF111-211ENST00000560952 GAD2Q05329 585 aa2.53□□□□□ -2
RNF111-211ENST00000560952 CHRNDQ07001 517 aa2.53□□□□□ -2
RNF111-211ENST00000560952 ABHD18Q0P651 414 aa2.53□□□□□ -2
RNF111-211ENST00000560952 CDC20Q12834 499 aa2.53□□□□□ -2
RNF111-211ENST00000560952 PTK6Q13882 451 aa2.53□□□□□ -2
RNF111-211ENST00000560952 SEC23BQ15437 767 aa2.53□□□□□ -2
RNF111-211ENST00000560952 PARP6Q2NL67 630 aa2.53□□□□□ -2
RNF111-211ENST00000560952 KLHL38Q2WGJ6 581 aa2.53□□□□□ -2
RNF111-211ENST00000560952 PGS1Q32NB8 556 aa2.53□□□□□ -2
RNF111-211ENST00000560952 UAP1L1Q3KQV9 507 aa2.53□□□□□ -2
RNF111-211ENST00000560952 GPAT3Q53EU6 434 aa2.53□□□□□ -2
RNF111-211ENST00000560952 RARS2Q5T160 578 aaKnown RBP2.53□□□□□ -2
RNF111-211ENST00000560952 STRIP1Q5VSL9 837 aa2.53□□□□□ -2
RNF111-211ENST00000560952 GARNL3Q5VVW2 1013 aa2.53□□□□□ -2
RNF111-211ENST00000560952 AFMIDQ63HM1 303 aa2.53□□□□□ -2
RNF111-211ENST00000560952 PLA2G4FQ68DD2 849 aa2.53□□□□□ -2
RNF111-211ENST00000560952 ETFRF1Q6IPR1 90 aa2.53□□□□□ -2
RNF111-211ENST00000560952 METAP1DQ6UB28 335 aaPredicted RBP2.53□□□□□ -2
RNF111-211ENST00000560952 TMEM270Q6UE05 265 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms