RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CDKN3Q16667 212 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 PID1Q7Z2X4 250 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 HEATR4Q86WZ0 1026 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 PELI3Q8N2H9 469 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 AP2M1Q96CW1 435 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 IMP4Q96G21 291 aaKnown RBP12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 PDXPQ96GD0 296 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 LGR4Q9BXB1 951 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 ABCG4Q9H172 646 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 SLC25A51Q9H1U9 297 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 GLOD4Q9HC38 313 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 CYP4F12Q9HCS2 524 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 MRPL40Q9NQ50 206 aaKnown RBP12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 GUCA1BQ9UMX6 200 aa12.96□□□□□ -0.33
CTDSPL2-209ENST00000560620 MIF4GDA9UHW6 222 aaKnown RBP12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 HACD1B0YJ81 288 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 ANKRD66B4E2M5 251 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 KRT86O43790 486 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 TJP3O95049 919 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 MT-CYBP00156 380 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 GIMD1P0DJR0 217 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 PYGMP11217 842 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 MYCLP1P12525 358 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 CKMT1AP12532 417 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 JUPP14923 745 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 NFKB1P19838 968 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 ACP1P24666 158 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 TRIM23P36406 574 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 RPIAP49247 311 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 CLDN6P56747 220 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 OTUD4Q01804 1114 aaKnown RBP12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 PTSQ03393 145 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 ILKQ13418 452 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 DOK6Q6PKX4 331 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 TMPRSS7Q7RTY8 843 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 GKN2Q86XP6 184 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 MARCH9Q86YJ5 346 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 FSTL5Q8N475 847 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 LRRC57Q8N9N7 239 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 OR1E3Q8WZA6 343 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 ALG3Q92685 438 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 SCAMP4Q969E2 229 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 TEKT5Q96M29 485 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 FAM118BQ9BPY3 351 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 TSGA10Q9BZW7 698 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 CLPBQ9H078 707 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 C10orf88Q9H8K7 445 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 NCKIPSDQ9NZQ3 722 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 SIRPGQ9P1W8 387 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 GULP1Q9UBP9 304 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 RSPH14Q9UHP6 348 aa12.95□□□□□ -0.34
CTDSPL2-209ENST00000560620 PRSS38A1L453 326 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 GOLGA6L9A6NEM1 432 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 LMO7DNF2Z398 122 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 TPP1O14773 563 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 YY2O15391 372 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 STK10O94804 968 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 DKK1O94907 266 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 CELA2BP08218 269 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 PIRTP0C851 137 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 RBL1P28749 1068 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 EIF3EP60228 445 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 CDK18Q07002 472 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 NOMO1Q15155 1222 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 NR0B2Q15466 257 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 SMAD1Q15797 465 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 QPCTQ16769 361 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 ST3GAL2Q16842 350 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 HES3Q5TGS1 186 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 DARS2Q6PI48 645 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 RFLNAQ6ZTI6 216 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 TECPR1Q7Z6L1 1165 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 TAF8Q7Z7C8 310 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 TMPRSS12Q86WS5 348 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 ACTL9Q8TC94 416 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 TBATAQ96M53 351 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 QKIQ96PU8 341 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 VAT1Q99536 393 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 RIOK2Q9BVS4 552 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 GPR63Q9BZJ6 419 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 ABCG8Q9H221 673 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 CARS2Q9HA77 564 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 FGF22Q9HCT0 170 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 PKD2L2Q9NZM6 624 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 FAM153AQ9UHL3 310 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 TRHDEQ9UKU6 1024 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 SHOC2Q9UQ13 582 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 EFR3BQ9Y2G0 817 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 PTPRBP23467 1997 aa12.94□□□□□ -0.34
CTDSPL2-209ENST00000560620 ARID1BQ8NFD5 2236 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 TNFRSF10CO14798 259 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 INPP4BO15327 924 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 ASMTLO95671 621 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms