RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 CSNK1EP49674 416 aaKnown RBP21.74■■□□□ 1.07
SNX1-210ENST00000560260 SPEM2Q0P670 501 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 LRRC14Q15048 493 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 TPRG1LQ5T0D9 272 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 CERCAMQ5T4B2 595 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 KYAT3Q6YP21 454 aaKnown RBP21.74■■□□□ 1.07
SNX1-210ENST00000560260 MICALCLQ6ZW33 695 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 NAT8LQ8N9F0 302 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 OR13H1Q8NG92 308 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 LRRC45Q96CN5 670 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 AGAP2Q99490 1192 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 TRABDQ9H4I3 376 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 CAPN10Q9HC96 672 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 BPIFA1Q9NP55 256 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 IL17CQ9P0M4 197 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 SUSD2Q9UGT4 822 aa21.74■■□□□ 1.07
SNX1-210ENST00000560260 A0A1B0GVT2 93 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 SOD1P00441 154 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 BPIP17213 487 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 TGM1P22735 817 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 CD38P28907 300 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 ADCY8P40145 1251 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 DPP6P42658 865 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 PFN3P60673 137 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 CDH17Q12864 832 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 MTM1Q13496 603 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 POU6F1Q14863 301 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 DUOXA1Q1HG43 343 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 TRIM61Q5EBN2 209 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 IZUMO3Q5VZ72 239 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 NOA1Q8NC60 698 aaKnown RBP21.73■■□□□ 1.07
SNX1-210ENST00000560260 GPR26Q8NDV2 337 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 CCHCR1Q8TD31 782 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 SRPK1Q96SB4 655 aaKnown RBP21.73■■□□□ 1.07
SNX1-210ENST00000560260 C1QTNF7Q9BXJ2 289 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 TRIM31Q9BZY9 425 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 GPR27Q9NS67 375 aa21.73■■□□□ 1.07
SNX1-210ENST00000560260 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.73■■□□□ 1.07
SNX1-210ENST00000560260 ZNF106Q9H2Y7 1883 aaKnown RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 PI4KAP42356 2102 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 FAM187AA6NFU0 413 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 LDB2O43679 373 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 CFIP05156 583 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 GNSP15586 552 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 HMGCLP35914 325 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 AFF3P51826 1226 aaKnown RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 ZNF140P52738 457 aaPredicted RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 CDK16Q00536 496 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 STAT4Q14765 748 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 TAF1AQ15573 450 aaPredicted RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 ALS2CLQ60I27 953 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 ESRP1Q6NXG1 681 aaKnown RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 ZNF765Q7L2R6 523 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 CAND1Q86VP6 1230 aaKnown RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 SLC22A18ASQ8N1D0 253 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 DNAAF3Q8N9W5 541 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 BRSK1Q8TDC3 778 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 RIOK2Q9BVS4 552 aaKnown RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 PKD2L2Q9NZM6 624 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 NFKBIL1Q9UBC1 381 aaPredicted RBP21.72■■□□□ 1.07
SNX1-210ENST00000560260 HS3ST3A1Q9Y663 406 aa21.72■■□□□ 1.07
SNX1-210ENST00000560260 CACNA1EQ15878 2313 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 A6NNZ2 444 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 GOLGA8MH3BSY2 632 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 FPGTO14772 594 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 VILLO15195 856 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 TP73O15350 636 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 RPL21P46778 160 aaKnown RBP21.71■■□□□ 1.07
SNX1-210ENST00000560260 SESN2P58004 480 aaPredicted RBP21.71■■□□□ 1.07
SNX1-210ENST00000560260 INPP5AQ14642 412 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 SF3A2Q15428 464 aaKnown RBP21.71■■□□□ 1.07
SNX1-210ENST00000560260 CCDC38Q502W7 563 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 HENMT1Q5T8I9 393 aaKnown RBP21.71■■□□□ 1.07
SNX1-210ENST00000560260 LRRC8BQ6P9F7 803 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 SLC23A3Q6PIS1 610 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 PTAR1Q7Z6K3 402 aaPredicted RBP21.71■■□□□ 1.07
SNX1-210ENST00000560260 PPIL6Q8IXY8 311 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 RAVER1Q8IY67 606 aaKnown RBP21.71■■□□□ 1.07
SNX1-210ENST00000560260 NRSN1Q8IZ57 195 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 MFSD2AQ8NA29 543 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 LRRN4CLQ8ND94 238 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 MCUQ8NE86 351 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 OR13C4Q8NGS5 318 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 RUBCNQ92622 972 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 FUBP1Q96AE4 644 aaKnown RBP21.71■■□□□ 1.07
SNX1-210ENST00000560260 AP2M1Q96CW1 435 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 CARD6Q9BX69 1037 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 CAAP1Q9H8G2 361 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 RALGAPA1Q6GYQ0 2036 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 ADAMTS9Q9P2N4 1935 aa21.71■■□□□ 1.07
SNX1-210ENST00000560260 ZFHX2Q9C0A1 2572 aaPredicted RBP21.7■■□□□ 1.06
SNX1-210ENST00000560260 PRR5-ARHGAP8B1AHC4 643 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 GAPDHSO14556 408 aaPredicted RBP21.7■■□□□ 1.06
SNX1-210ENST00000560260 AVILO75366 819 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 THEGLP0DJG4 465 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 NXPH1P58417 271 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 IRX4P78413 519 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 CRADDP78560 199 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 DPTQ07507 201 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 GRIK2Q13002 908 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms