RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SDR16C5Q8N3Y7 309 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 SLC25A41Q8N5S1 370 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 TP53I13Q8NBR0 393 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 MCUQ8NE86 351 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 PTCD2Q8WV60 388 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 AP2M1Q96CW1 435 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 RANBP9Q96S59 729 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 IL22Q9GZX6 179 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 DDX47Q9H0S4 455 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 FAM83DQ9H4H8 585 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 PHPT1Q9NRX4 125 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 TMEM74BQ9NUR3 256 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 BFARQ9NZS9 450 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 GGT7Q9UJ14 662 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 RIMKLBQ9ULI2 386 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 ANKRD6Q9Y2G4 727 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 PCDH15Q96QU1 1955 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 TMEM131Q92545 1883 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 A0A1W2PR77 199 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 HEATR9A2RTY3 570 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 GPR89AB7ZAQ6 455 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 TNFRSF10CO14798 259 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 STX7O15400 261 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 CLDN7O95471 211 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 GPR89BP0CG08 455 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 THEGLP0DJG4 465 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 ADCY8P40145 1251 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 LIMK1P53667 647 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 KIAA1024LP59773 190 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 PFN3P60673 137 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 SPEM2Q0P670 501 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 PEX6Q13608 980 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 ITGA9Q13797 1035 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 SUZ12Q15022 739 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 SKIDA1Q1XH10 827 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 WSCD2Q2TBF2 565 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 PNCKQ6P2M8 343 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 ADAMTSL4Q6UY14 1074 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 PRR23CQ6ZRP0 262 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 Q6ZVL8 140 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 ASCL5Q7RTU5 278 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 LYSMD3Q7Z3D4 306 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 PPIL6Q8IXY8 311 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 CEP112Q8N8E3 955 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 BLOC1S5Q8TDH9 187 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 BTN2A2Q8WVV5 523 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 TBATAQ96M53 351 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 SLC6A18Q96N87 628 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 GORASP1Q9BQQ3 440 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 RAB17Q9H0T7 212 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 EBF2Q9HAK2 575 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 GPR27Q9NS67 375 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 ASIC3Q9UHC3 531 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 NEU2Q9Y3R4 380 aa12.03□□□□□ -0.48
RABGGTA-215ENST00000560207 SPTY2D1-AS1A0A0U1RR47 76 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 A8MX80 341 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 H3BM21 787 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 FANCGO15287 622 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 PRKCGP05129 697 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 ITIH2P19823 946 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 ADRA1DP25100 572 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 ETV3P41162 512 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 CTSKP43235 329 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 GPR1P46091 355 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 RXRGP48443 463 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 CSNK1EP49674 416 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 NXPH1P58417 271 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 TUBB4BP68371 445 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 FGL2Q14314 439 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 INPP5AQ14642 412 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 IRF4Q15306 451 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 ZNF423Q2M1K9 1284 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 INAVAQ3KP66 663 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 AASDHQ4L235 1098 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 GLE1Q53GS7 698 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 DENND2CQ68D51 928 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 DENND5AQ6IQ26 1287 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 LRRC8BQ6P9F7 803 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 MACC1Q6ZN28 852 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 GCNT7Q6ZNI0 430 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 Q6ZSR6 202 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 HSD11B1LQ7Z5J1 315 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 TSPAN33Q86UF1 283 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 PARGQ86W56 976 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 KLHL7Q8IXQ5 586 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 TRAM1L1Q8N609 369 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 STYXQ8WUJ0 223 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 HEXDCQ8WVB3 486 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 KLK6Q92876 244 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 BMFQ96LC9 184 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 NAT9Q9BTE0 207 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 APOOQ9BUR5 198 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 TEX101Q9BY14 249 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 WDR26Q9H7D7 661 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 RMI1Q9H9A7 625 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 CASS4Q9NQ75 786 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 IL17CQ9P0M4 197 aa12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 PCDHGB2Q9Y5G2 931 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms