RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TP53INP2Q8IXH6 220 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 CBARPQ8N350 705 aaPredicted RBP13.09□□□□□ -0.31
TPM1-220ENST00000559556 ZDHHC1Q8WTX9 485 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 USP7Q93009 1102 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 NUDCD1Q96RS6 583 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 SEMA3CQ99985 751 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 FAM117AQ9C073 453 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 RDH14Q9HBH5 336 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 ANO10Q9NW15 660 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 TAAR2Q9P1P5 351 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 MOSPD1Q9UJG1 213 aa13.09□□□□□ -0.31
TPM1-220ENST00000559556 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 TERTO14746 1132 aaKnown RBP13.08□□□□□ -0.32
TPM1-220ENST00000559556 SNRNP200O75643 2136 aaKnown RBP13.08□□□□□ -0.32
TPM1-220ENST00000559556 FGF1P05230 155 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 GZMAP12544 262 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 ITGB6P18564 788 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 WT1P19544 449 aaPredicted RBP13.08□□□□□ -0.32
TPM1-220ENST00000559556 LHCGRP22888 699 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 NFKBIAP25963 317 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 GPR3P46089 330 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 OR1D5P58170 312 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 CDK3Q00526 305 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 TRAF2Q12933 501 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 DPYSL2Q16555 572 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 ZNF574Q6ZN55 896 aaPredicted RBP13.08□□□□□ -0.32
TPM1-220ENST00000559556 PGBD5Q8N414 524 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 ZSCAN1Q8NBB4 408 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 MCCC1Q96RQ3 725 aaPredicted RBP13.08□□□□□ -0.32
TPM1-220ENST00000559556 MGME1Q9BQP7 344 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 NUDT22Q9BRQ3 303 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 ARHGAP9Q9BRR9 750 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 AKAP7Q9P0M2 348 aaPredicted RBP13.08□□□□□ -0.32
TPM1-220ENST00000559556 PHTF1Q9UMS5 762 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 SUFUQ9UMX1 484 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 SLC17A4Q9Y2C5 497 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 PCDHB11Q9Y5F2 797 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 PCDHGC4Q9Y5F7 938 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 HEMK1Q9Y5R4 338 aaPredicted RBP13.08□□□□□ -0.32
TPM1-220ENST00000559556 ST14Q9Y5Y6 855 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 ANKRD12Q6UB98 2062 aa13.08□□□□□ -0.32
TPM1-220ENST00000559556 IGHV5-10-1A0A0J9YXX1 117 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 TTC24A2A3L6 582 aaPredicted RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 RHPN2P1A8MT19 583 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 STMND1H3BQB6 276 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 AGRPO00253 132 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 ZW10O43264 779 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 MAFKO60675 156 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 ECEL1O95672 775 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 IVLP07476 585 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 FAM87AP0C7U9 286 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 CYP2A6P11509 494 aaPredicted RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 SFTPCP11686 197 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 AK4P27144 223 aaPredicted RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 ALDH4A1P30038 563 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 ETV3P41162 512 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 CSRP3P50461 194 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 ARSDP51689 593 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 LIMK2P53671 638 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 DPTQ07507 201 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 TRA2AQ13595 282 aaKnown RBP eCLIP13.07□□□□□ -0.32
TPM1-220ENST00000559556 TBR1Q16650 682 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 AMZ1Q400G9 498 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 RALGPS1Q5JS13 557 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 TMEM164Q5U3C3 297 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 SLC30A9Q6PML9 568 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 SASS6Q6UVJ0 657 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 HSD11B1LQ7Z5J1 315 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 NAGSQ8N159 534 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 RCBTB1Q8NDN9 531 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 PDCD6IPQ8WUM4 868 aaKnown RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 PATE1Q8WXA2 126 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 HTR3CQ8WXA8 447 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 SCARF2Q96GP6 870 aaPredicted RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 FUCA2Q9BTY2 467 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 CDH19Q9H159 772 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 NOD2Q9HC29 1040 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 ETNK2Q9NVF9 386 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 CNOT8Q9UFF9 292 aaKnown RBP13.07□□□□□ -0.32
TPM1-220ENST00000559556 PPIL1Q9Y3C6 166 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
TPM1-220ENST00000559556 ESPL1Q14674 2120 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 SHANK1Q9Y566 2161 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 H3BRJ5 948 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 PGLSO95336 258 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 SOD1P00441 154 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 FGF3P11487 239 aaPredicted RBP13.06□□□□□ -0.32
TPM1-220ENST00000559556 CCL4P13236 92 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 IL1R2P27930 398 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 CD1CP29017 333 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 PCK1P35558 622 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 ADCY8P40145 1251 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 ARL4AP40617 200 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 PRKCIP41743 596 aa13.06□□□□□ -0.32
TPM1-220ENST00000559556 GNPDA1P46926 289 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms