RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 DFNA5O60443 496 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 CTSLP07711 333 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 CDK11BP21127 795 aaKnown RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 EPHA8P29322 1005 aaPredicted RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 SDC4P31431 198 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 CDH5P33151 784 aaPredicted RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 SOX5P35711 763 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 NSFP46459 744 aaKnown RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 CLDN2P57739 230 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 CDR2Q01850 454 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 CYP4F3Q08477 520 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 MTA1Q13330 715 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 SYCP1Q15431 976 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 SHBQ15464 509 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 SETMARQ53H47 684 aaPredicted RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 ZNF542PQ5EBM4 170 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 AGBL4Q5VU57 503 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 SEL1L3Q68CR1 1132 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 SASS6Q6UVJ0 657 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 CCNI2Q6ZMN8 369 aaPredicted RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 DPY19L3Q6ZPD9 716 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 PTAR1Q7Z6K3 402 aaPredicted RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 GLRX5Q86SX6 157 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 SETD3Q86TU7 594 aaPredicted RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 SPATS2Q86XZ4 545 aaKnown RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 DCAF4L2Q8NA75 395 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 NETO2Q8NC67 525 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 TMEM52Q8NDY8 209 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 ANKRD20A12PQ8NF67 263 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 NEK11Q8NG66 645 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 OR2A12Q8NGT7 310 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 JOSD2Q8TAC2 188 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 HNRNPLLQ8WVV9 542 aaKnown RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 NAA15Q9BXJ9 866 aaKnown RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 MAGEB5Q9BZ81 275 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 ZYG11BQ9C0D3 744 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 LMBRD1Q9NUN5 540 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 FAM8A1Q9UBU6 413 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 DNAI1Q9UI46 699 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 NOCTQ9UK39 431 aaKnown RBP7.46□□□□□ -1.22
SPG11-213ENST00000558988 TBC1D30Q9Y2I9 924 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 PTPRBP23467 1997 aa7.46□□□□□ -1.22
SPG11-213ENST00000558988 PLXNB3Q9ULL4 1909 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 A0A1W2PQC6 194 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 TRABD2BA6NFA1 517 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 TMCO5BA8MYB1 307 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 PRAMEF26H0Y7S4 382 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 KRIT1O00522 736 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 NEMP1O14524 444 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 ALOX15BO15296 676 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 SLC7A4O43246 635 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 LATO43561 262 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 THEGLP0DJG4 465 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 JUPP14923 745 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 CHRNB2P17787 502 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 GKP32189 559 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 STAT1P42224 750 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 GABRB2P47870 512 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 SERPINH1P50454 418 aaKnown RBP7.45□□□□□ -1.22
SPG11-213ENST00000558988 COPB1P53618 953 aaKnown RBP7.45□□□□□ -1.22
SPG11-213ENST00000558988 TAS2R38P59533 333 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 NANOS3P60323 173 aaKnown RBP7.45□□□□□ -1.22
SPG11-213ENST00000558988 DAB2P98082 770 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 FMO1Q01740 532 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 GNA12Q03113 381 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 UBXN1Q04323 297 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 STX1AQ16623 288 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 ARL13BQ3SXY8 428 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 LRRC73Q5JTD7 316 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 PIP5KL1Q5T9C9 394 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 RETSATQ6NUM9 610 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 SCYL2Q6P3W7 929 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 DNAJC14Q6Y2X3 702 aaPredicted RBP7.45□□□□□ -1.22
SPG11-213ENST00000558988 TRIM69Q86WT6 500 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 PROSER1Q86XN7 944 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 ZNF683Q8IZ20 524 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 GALNT15Q8N3T1 639 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 AOPEPQ8N6M6 819 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 CCDC185Q8N715 623 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 SAP25Q8TEE9 199 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 FAM172AQ8WUF8 416 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 PPP1R16AQ96I34 528 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 GBP4Q96PP9 640 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 SELENOOQ9BVL4 669 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 PREBQ9HCU5 417 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 ADAM22Q9P0K1 906 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 OR12D3Q9UGF7 316 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 KLHL3Q9UH77 587 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 IL36AQ9UHA7 158 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 HS3ST2Q9Y278 367 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 ITM2BQ9Y287 266 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 TDRD6O60522 2096 aaKnown RBP7.45□□□□□ -1.22
SPG11-213ENST00000558988 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
SPG11-213ENST00000558988 KMT2BQ9UMN6 2715 aaPredicted RBP7.44□□□□□ -1.22
SPG11-213ENST00000558988 ILVBLA1L0T0 632 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 ANKRD62A6NC57 917 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 DRGXA6NNA5 263 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 FAM72CH0Y354 149 aa7.44□□□□□ -1.22
SPG11-213ENST00000558988 GOLGA6L22H0YM25 854 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms