RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 REC114Q7Z4M0 266 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ABI3BPQ7Z7G0 1075 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TTC7BQ86TV6 843 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 GATAD2AQ86YP4 633 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 DMRTC2Q8IXT2 367 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC22A18ASQ8N1D0 253 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PGBD5Q8N414 524 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 KCTD6Q8NC69 237 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 GPBAR1Q8TDU6 330 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SKA1Q96BD8 255 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ECHDC3Q96DC8 303 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PANX2Q96RD6 677 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 KLF6Q99612 283 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 NRSN2Q9GZP1 204 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PIF1Q9H611 641 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ERVMER34-1Q9H9K5 563 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 GPR27Q9NS67 375 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 WDFY3Q8IZQ1 3526 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 COL5A1P20908 1838 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 KNTC1P50748 2209 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 POM121BA6NF01 834 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 NEMP1O14524 444 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 TRAFD1O14545 582 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 DDX3YO15523 660 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 MAGEC1O60732 1142 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 PRKCGP05129 697 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 CR2P20023 1033 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 KDELR1P24390 212 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 SERPINA4P29622 427 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 MMP12P39900 470 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 GARSP41250 739 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 ARHGAP25P42331 645 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 GRK6P43250 576 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 MAGEA1P43355 309 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 RXRGP48443 463 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 SCNN1BP51168 640 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 RENBPP51606 427 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 HADHBP55084 474 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 AP1S1P61966 158 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 SHC2P98077 582 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 GBE1Q04446 702 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 CLCQ05315 142 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 NSUN2Q08J23 767 aaKnown RBP eCLIP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC10A2Q12908 348 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 BNIP3Q12983 259 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 HNRNPDQ14103 355 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZNF235Q14590 738 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 GRM3Q14832 879 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 TRIP6Q15654 476 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 UGP2Q16851 508 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 TMEM52BQ4KMG9 183 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 TPRG1LQ5T0D9 272 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 KYAT3Q6YP21 454 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 KANSL1Q7Z3B3 1105 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 GLRX5Q86SX6 157 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZSCAN30Q86W11 494 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 CCDC170Q8IYT3 715 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 TEX26Q8N6G2 289 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 GALNT11Q8NCW6 608 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 HCAR2Q8TDS4 363 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 SAP25Q8TEE9 199 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 SETD7Q8WTS6 366 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 ASB12Q8WXK4 309 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 BMFQ96LC9 184 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZNF641Q96N77 438 aaPredicted RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 FERD3LQ96RJ6 166 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 MGME1Q9BQP7 344 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 WRAP53Q9BUR4 548 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 GOLPH3Q9H4A6 298 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 CCDC86Q9H6F5 360 aaKnown RBP6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 ATP13A3Q9H7F0 1226 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 PCDH12Q9NPG4 1184 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 ATP8A1Q9Y2Q0 1164 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 HYOU1Q9Y4L1 999 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 DMXL2Q8TDJ6 3036 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 CACNA1BQ00975 2339 aa6.06□□□□□ -1.44
CTDSPL2-204ENST00000558966 KMT2BQ9UMN6 2715 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ANKRD11Q6UB99 2663 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 LRRD1A4D1F6 860 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 A6NNZ2 444 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZNF487B1APH4 448 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 HTRA2O43464 458 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SPINK2P20155 84 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 COMTP21964 271 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 CYLC1P35663 651 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 IGFALSP35858 605 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 HSPA9P38646 679 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MMP13P45452 471 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ARRB1P49407 418 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SUOXP51687 545 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 PFN3P60673 137 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MAXP61244 160 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SEMG2Q02383 582 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 BCL2L1Q07817 233 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ELP6Q0PNE2 266 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 RALGDSQ12967 914 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 IHHQ14623 411 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SUZ12Q15022 739 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SETDB1Q15047 1291 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms