RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ZNF451Q9Y4E5 1061 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 CACNA1CQ13936 2221 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 FER1L5A0AVI2 2057 aa11.83□□□□□ -0.51
SMAD3-206ENST00000558739 A6NL46 340 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 THAP12O43422 761 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 DPM1O60762 260 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 LRCH4O75427 683 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 CEACAM4O75871 244 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 RHOBTB3O94955 611 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 NDUFA10O95299 355 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 IGSF6O95976 241 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 MYCLP1P12525 358 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 FMO5P49326 533 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 RHOAP61586 193 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 RAPGEF1Q13905 1077 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 FOXD4L5Q5VV16 416 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 FAM199XQ6PEV8 388 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 DOK6Q6PKX4 331 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 LYSMD3Q7Z3D4 306 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 PHLDB2Q86SQ0 1253 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 FOXD4L4Q8WXT5 416 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 MAGEB5Q9BZ81 275 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 METTL14Q9HCE5 456 aaKnown RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 TRNAU1APQ9NX07 287 aaKnown RBP11.83□□□□□ -0.52
SMAD3-206ENST00000558739 LHX3Q9UBR4 397 aa11.83□□□□□ -0.52
SMAD3-206ENST00000558739 SEC16AO15027 2179 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 FAM72CH0Y354 149 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 BUB1O43683 1085 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 YEATS4O95619 227 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 HOXC4P09017 264 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 GARSP41250 739 aaKnown RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 NOP2P46087 812 aaKnown RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 FASLGP48023 281 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 SEPHS1P49903 392 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 PMS1P54277 932 aaKnown RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 RNASE9P60153 205 aaKnown RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 MTA1Q13330 715 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 CUL4AQ13619 759 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 PTPN20Q4JDL3 420 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 EFHC1Q5JVL4 640 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 MIIPQ5JXC2 388 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 FAM72AQ5TYM5 149 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 FAM72DQ6L9T8 149 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 TRNP1Q6NT89 227 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 ERAP2Q6P179 960 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 PNCKQ6P2M8 343 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 SLC26A9Q7LBE3 791 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 NLRP14Q86W24 1093 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 FAM72BQ86X60 149 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 FAM131BQ86XD5 332 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 CAMK1DQ8IU85 385 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 IQCKQ8N0W5 287 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 C1orf131Q8NDD1 294 aaKnown RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 ZNF606Q8WXB4 792 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 C1orf74Q96LT6 269 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 OR6C1Q96RD1 312 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 NCAPGQ9BPX3 1015 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 TBC1D10AQ9BXI6 508 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 TRIM8Q9BZR9 551 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 BRD8Q9H0E9 1235 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 LHX9Q9NQ69 397 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 FAM13BQ9NYF5 915 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 PHTF1Q9UMS5 762 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 MFHAS1Q9Y4C4 1052 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 PCYT1BQ9Y5K3 369 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-206ENST00000558739 ABCA4P78363 2273 aa11.82□□□□□ -0.52
SMAD3-206ENST00000558739 CETN3O15182 167 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 GNA15P30679 374 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 RGRP47804 291 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 ME1P48163 572 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 DEUP1Q05D60 604 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 ELOAQ14241 798 aaKnown RBP11.81□□□□□ -0.52
SMAD3-206ENST00000558739 MANEALQ5VSG8 457 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 RWDD4Q6NW29 188 aaKnown RBP11.81□□□□□ -0.52
SMAD3-206ENST00000558739 LIPIQ6XZB0 460 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 RASGRP3Q8IV61 690 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 SFRP1Q8N474 314 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 UBE2Q2Q8WVN8 375 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 NT5C3BQ969T7 300 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
SMAD3-206ENST00000558739 SUV39H2Q9H5I1 410 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 NOL6Q9H6R4 1146 aaKnown RBP11.81□□□□□ -0.52
SMAD3-206ENST00000558739 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 OSGIN2Q9Y236 505 aa11.81□□□□□ -0.52
SMAD3-206ENST00000558739 MN1Q10571 1320 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-206ENST00000558739 A0A1B0GVL5 298 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 TRIM49BA6NDI0 452 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 E2F3O00716 465 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 ZNF185O15231 689 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 SLC16A3O15427 465 aaKnown RBP11.8□□□□□ -0.52
SMAD3-206ENST00000558739 ELFN1P0C7U0 828 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 PFKFB1P16118 471 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 FLT3P36888 993 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 NDST2P52849 883 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 GEMIN4P57678 1058 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms