RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CTSKP43235 329 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 RABIFP47224 123 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 ATXN3P54252 364 aaPredicted RBP25.52■■□□□ 1.68
SMAD6-202ENST00000557916 NXPH1P58417 271 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 INPP5AQ14642 412 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 DENND5AQ6IQ26 1287 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 TMC3Q7Z5M5 1100 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 RAVER1Q8IY67 606 aaKnown RBP25.52■■□□□ 1.68
SMAD6-202ENST00000557916 PLA2G15Q8NCC3 412 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 EID2BQ96D98 161 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 EDEM2Q9BV94 578 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 PKD2L2Q9NZM6 624 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 CD84Q9UIB8 345 aa25.52■■□□□ 1.68
SMAD6-202ENST00000557916 KIF2AO00139 706 aaPredicted RBP25.51■■□□□ 1.67
SMAD6-202ENST00000557916 AURKAO14965 403 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 GAS8O95995 478 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 PFN3P60673 137 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 BASP1P80723 227 aaKnown RBP25.51■■□□□ 1.67
SMAD6-202ENST00000557916 ESRP1Q6NXG1 681 aaKnown RBP25.51■■□□□ 1.67
SMAD6-202ENST00000557916 IL27RAQ6UWB1 636 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 LINC00523Q86TU6 105 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 NRSN1Q8IZ57 195 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 ZNF592Q92610 1267 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 ABCG8Q9H221 673 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 GDF3Q9NR23 364 aa25.51■■□□□ 1.67
SMAD6-202ENST00000557916 CCDC188H7C350 402 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 ECEL1O95672 775 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 APRTP07741 180 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 SPINT3P49223 89 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 VPS41P49754 854 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 YPEL5P62699 121 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 GPS1Q13098 491 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 MTM1Q13496 603 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 HLA-BQ31612 363 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 SPATS2Q86XZ4 545 aaKnown RBP25.5■■□□□ 1.67
SMAD6-202ENST00000557916 DCP2Q8IU60 420 aaKnown RBP25.5■■□□□ 1.67
SMAD6-202ENST00000557916 KLHL7Q8IXQ5 586 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 AP2M1Q96CW1 435 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 NEU2Q9Y3R4 380 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 PCDH15Q96QU1 1955 aa25.5■■□□□ 1.67
SMAD6-202ENST00000557916 RGSL1A5PLK6 1076 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 TOR1BO14657 336 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 GDF9O60383 454 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 SUN1O94901 812 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 PNCKQ6P2M8 343 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 ZNF765Q7L2R6 523 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 GLT6D1Q7Z4J2 308 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 SLC22A18ASQ8N1D0 253 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 PELI3Q8N2H9 469 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 TTC30BQ8N4P2 665 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 SCAMP4Q969E2 229 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 PCYOX1Q9UHG3 505 aa25.49■■□□□ 1.67
SMAD6-202ENST00000557916 K7ESM1 405 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 HMGCLP35914 325 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 DPTQ07507 201 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 PDE1CQ14123 709 aaPredicted RBP25.48■■□□□ 1.67
SMAD6-202ENST00000557916 PPP1R21Q6ZMI0 780 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 NLRP8Q86W28 1048 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 MINDY1Q8N5J2 469 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 OR2I1PQ8NGU4 316 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 RUNDC3BQ96NL0 473 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 APOOQ9BUR5 198 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 FAM83DQ9H4H8 585 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 GAREM1Q9H706 876 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 TMEM9BQ9NQ34 198 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 EIF2B3Q9NR50 452 aaKnown RBP25.48■■□□□ 1.67
SMAD6-202ENST00000557916 GPR27Q9NS67 375 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 OR1A2Q9Y585 309 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 KNL1Q8NG31 2342 aa25.48■■□□□ 1.67
SMAD6-202ENST00000557916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.47■■□□□ 1.67
SMAD6-202ENST00000557916 CDX4O14627 284 aaPredicted RBP25.47■■□□□ 1.67
SMAD6-202ENST00000557916 URI1O94763 535 aaPredicted RBP25.47■■□□□ 1.67
SMAD6-202ENST00000557916 CER1O95813 267 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 TSHRP16473 764 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 THOP1P52888 689 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 MSLNQ13421 630 aaPredicted RBP25.47■■□□□ 1.67
SMAD6-202ENST00000557916 PPP1R7Q15435 360 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 RAET1GQ6H3X3 334 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 DNAAF3Q8N9W5 541 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 OR52K1Q8NGK4 314 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 BRSK1Q8TDC3 778 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 SLCO2A1Q92959 643 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 RIOK2Q9BVS4 552 aaKnown RBP25.47■■□□□ 1.67
SMAD6-202ENST00000557916 BPIFA1Q9NP55 256 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 RAD18Q9NS91 495 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 PIH1D1Q9NWS0 290 aaKnown RBP25.47■■□□□ 1.67
SMAD6-202ENST00000557916 ADAMTS9Q9P2N4 1935 aa25.47■■□□□ 1.67
SMAD6-202ENST00000557916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.46■■□□□ 1.67
SMAD6-202ENST00000557916 TPH1P17752 444 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 TRIM23P36406 574 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 TERF1P54274 439 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 CDH17Q12864 832 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 ZNF423Q2M1K9 1284 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 PRAMEF14Q5SWL7 426 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 TPRG1LQ5T0D9 272 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 ERVMER34-1Q9H9K5 563 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 IL21RQ9HBE5 538 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 SPTY2D1-AS1A0A0U1RR47 76 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 C2orf81A6NN90 581 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 BUD23O43709 281 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms