RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CYP1B1Q16678 543 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 HS1BP3Q53T59 392 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 CCDC137Q6PK04 289 aaKnown RBP14.32□□□□□ -0.12
USP3-205ENST00000557884 IL27RAQ6UWB1 636 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 RANBP10Q6VN20 620 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 KLHDC8BQ8IXV7 354 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 ATL2Q8NHH9 583 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 CCHCR1Q8TD31 782 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 SCAMP4Q969E2 229 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 EID2BQ96D98 161 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 ABCG8Q9H221 673 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 LRRC40Q9H9A6 602 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 PIH1D1Q9NWS0 290 aaKnown RBP14.32□□□□□ -0.12
USP3-205ENST00000557884 PKD2L2Q9NZM6 624 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 CEP192Q8TEP8 1941 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 PLXNA2O75051 1894 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 E7EVH7 732 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
USP3-205ENST00000557884 BUD23O43709 281 aaKnown RBP14.31□□□□□ -0.12
USP3-205ENST00000557884 AP2A1O95782 977 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 FDFT1P37268 417 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 SPINT3P49223 89 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 THOP1P52888 689 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 ARHGAP8P85298 464 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 MTM1Q13496 603 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 RSPO4Q2I0M5 234 aaPredicted RBP14.31□□□□□ -0.12
USP3-205ENST00000557884 ZNF423Q2M1K9 1284 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 ZNF542PQ5EBM4 170 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 ALS2CLQ60I27 953 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 KCTD11Q693B1 232 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 RAET1GQ6H3X3 334 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 ESRP1Q6NXG1 681 aaKnown RBP14.31□□□□□ -0.12
USP3-205ENST00000557884 NYAP1Q6ZVC0 841 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 TTC30BQ8N4P2 665 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 NETO1Q8TDF5 533 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 LRRC45Q96CN5 670 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 AP2M1Q96CW1 435 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 AGAP2Q99490 1192 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 APOOQ9BUR5 198 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 RIOK2Q9BVS4 552 aaKnown RBP14.31□□□□□ -0.12
USP3-205ENST00000557884 BPIFA1Q9NP55 256 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 CDV3Q9UKY7 258 aaKnown RBP14.31□□□□□ -0.12
USP3-205ENST00000557884 ANKRD36A6QL64 1941 aa14.31□□□□□ -0.12
USP3-205ENST00000557884 PSMD3O43242 534 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 KRT14P02533 472 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 TPH1P17752 444 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 PAFAH1B1P43034 410 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 GPR1P46091 355 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 YPEL5P62699 121 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 BASP1P80723 227 aaKnown RBP14.3□□□□□ -0.12
USP3-205ENST00000557884 SEMA5AQ13591 1074 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 FZD2Q14332 565 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 DENND5AQ6IQ26 1287 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 PNCKQ6P2M8 343 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 GLT6D1Q7Z4J2 308 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 TMC3Q7Z5M5 1100 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 NRSN1Q8IZ57 195 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 FAM174AQ8TBP5 190 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 FUBP1Q96AE4 644 aaKnown RBP14.3□□□□□ -0.12
USP3-205ENST00000557884 ELF4Q99607 663 aaPredicted RBP14.3□□□□□ -0.12
USP3-205ENST00000557884 DDX47Q9H0S4 455 aaKnown RBP14.3□□□□□ -0.12
USP3-205ENST00000557884 WDR26Q9H7D7 661 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 GPR27Q9NS67 375 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 DNAAF2Q9NVR5 837 aaKnown RBP14.3□□□□□ -0.12
USP3-205ENST00000557884 ARL5AQ9Y689 179 aa14.3□□□□□ -0.12
USP3-205ENST00000557884 PCDH15Q96QU1 1955 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 TRPM6Q9BX84 2022 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 CEP250Q9BV73 2442 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 SPTY2D1-AS1A0A0U1RR47 76 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 A0A1B0GTQ1 180 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 SDC3O75056 442 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 APRTP07741 180 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 GRIA1P42261 906 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 FNTAP49354 379 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 CCT8P50990 548 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 LIMK1P53667 647 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 GPS1Q13098 491 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 PTPRCAPQ14761 206 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 NFATC4Q14934 902 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 SHBQ15464 509 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 PPP1R21Q6ZMI0 780 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 ZNF765Q7L2R6 523 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 HEATR4Q86WZ0 1026 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 DCP2Q8IU60 420 aaKnown RBP14.29□□□□□ -0.12
USP3-205ENST00000557884 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 OR52K1Q8NGK4 314 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 SRPK1Q96SB4 655 aaKnown RBP14.29□□□□□ -0.12
USP3-205ENST00000557884 LGR4Q9BXB1 951 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 FAM83DQ9H4H8 585 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 TRABDQ9H4I3 376 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 ERVMER34-1Q9H9K5 563 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 TM7SF3Q9NS93 570 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 DNAJC28Q9NX36 388 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 KCTD5Q9NXV2 234 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 HACD3Q9P035 362 aa14.29□□□□□ -0.12
USP3-205ENST00000557884 RGSL1A5PLK6 1076 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 CACNB4O00305 520 aaPredicted RBP14.28□□□□□ -0.12
USP3-205ENST00000557884 SCAMP1O15126 338 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 SOD1P00441 154 aa14.28□□□□□ -0.12
USP3-205ENST00000557884 TSHRP16473 764 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms