RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 Q6ZVL8 140 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 SPRED1Q7Z699 444 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 TSPAN33Q86UF1 283 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 SCRN2Q96FV2 425 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 SEMA3CQ99985 751 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 TEX101Q9BY14 249 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 CTTNBP2NLQ9P2B4 639 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 LRIT1Q9P2V4 623 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 TTLL3Q9Y4R7 772 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 RNF215Q9Y6U7 377 aa14.62□□□□□ -0.07
SHMT2-235ENST00000557740 ANKRD36A6QL64 1941 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 GYPCP04921 128 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 TPM3P06753 285 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 CD48P09326 243 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 CCNB1P14635 433 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 CA4P22748 312 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 TEAD1P28347 426 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 GALNT2Q10471 571 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 DPYSL3Q14195 570 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 MAP9Q49MG5 647 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 NCBP2-AS2Q69YL0 99 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 DOK6Q6PKX4 331 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 MAP7D3Q8IWC1 876 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 SFTPA2Q8IWL1 248 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHMT2-235ENST00000557740 KCTD6Q8NC69 237 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 GPBAR1Q8TDU6 330 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 CTNNBL1Q8WYA6 563 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-235ENST00000557740 ZNF670Q9BS34 389 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 FRMD8Q9BZ67 464 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-235ENST00000557740 TRNAU1APQ9NX07 287 aaKnown RBP14.61□□□□□ -0.07
SHMT2-235ENST00000557740 IFNKQ9P0W0 207 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 TAAR2Q9P1P5 351 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 PISDQ9UG56 409 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 DNPEPQ9ULA0 475 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 ATXN7L1Q9ULK2 861 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-235ENST00000557740 SUFUQ9UMX1 484 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 LOXL2Q9Y4K0 774 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 PCDHGA7Q9Y5G6 932 aa14.61□□□□□ -0.07
SHMT2-235ENST00000557740 BPTFQ12830 3046 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 RHPN2P1A8MT19 583 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 ZW10O43264 779 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 C1QL1O75973 258 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 PROSCO94903 275 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 MAP3K6O95382 1288 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 CEACAM5P06731 702 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 HGFP14210 728 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 ZNF30P17039 623 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 CES1P23141 567 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 IL4RP24394 825 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 SLC5A2P31639 672 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 CASP14P31944 242 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 GPR1P46091 355 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 MAZP56270 477 aaKnown RBP14.6□□□□□ -0.07
SHMT2-235ENST00000557740 DSC2Q02487 901 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 PEX6Q13608 980 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 PAFAH1B3Q15102 231 aaKnown RBP14.6□□□□□ -0.07
SHMT2-235ENST00000557740 PDK2Q15119 407 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 PTPRRQ15256 657 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 IFI16Q16666 785 aaKnown RBP14.6□□□□□ -0.07
SHMT2-235ENST00000557740 ZSCAN23Q3MJ62 389 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 ZFYVE27Q5T4F4 411 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 PHF19Q5T6S3 580 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 LRRC66Q68CR7 880 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 SLC30A9Q6PML9 568 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 CBARPQ8N350 705 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-235ENST00000557740 TEX26Q8N6G2 289 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 FAM71BQ8TC56 605 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 ZDHHC1Q8WTX9 485 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 PIH1D2Q8WWB5 315 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 CDH19Q9H159 772 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 SPATS2LQ9NUQ6 558 aaKnown RBP14.6□□□□□ -0.07
SHMT2-235ENST00000557740 UVRAGQ9P2Y5 699 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 CD84Q9UIB8 345 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 LCMT1Q9UIC8 334 aa14.6□□□□□ -0.07
SHMT2-235ENST00000557740 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHMT2-235ENST00000557740 AHCTF1Q8WYP5 2266 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 AGRPO00253 132 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 MATN3O15232 486 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 IVLP07476 585 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 PDHA1P08559 390 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 KRT7P08729 469 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 H2AFZP0C0S5 128 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 AK4P27144 223 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-235ENST00000557740 ARSEP51690 589 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 DPTQ07507 201 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 CLN3Q13286 438 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 AMZ1Q400G9 498 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 ANKRD20A8PQ5CZ79 823 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 ALG1LQ6GMV1 187 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 ADAMTSL4Q6UY14 1074 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 CCDC81Q6ZN84 652 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 H2AFVQ71UI9 128 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 TECPR1Q7Z6L1 1165 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 NRROSQ86YC3 692 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 MAML1Q92585 1016 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 TMEM159Q96B96 161 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 AP2M1Q96CW1 435 aa14.59□□□□□ -0.07
SHMT2-235ENST00000557740 ZNF830Q96NB3 372 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-235ENST00000557740 OR2M4Q96R27 311 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms