RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 EIF2B5Q13144 721 aaKnown RBP10.67□□□□□ -0.7
LINC00239-201ENST00000556973 HS1BP3Q53T59 392 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 TPRG1LQ5T0D9 272 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 FAXCQ5TGI0 409 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 KDM7AQ6ZMT4 941 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 TMC3Q7Z5M5 1100 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 SLC25A45Q8N413 288 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 EID2Q8N6I1 236 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 MAIP1Q8WWC4 291 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 FUBP1Q96AE4 644 aaKnown RBP10.67□□□□□ -0.7
LINC00239-201ENST00000556973 AP2M1Q96CW1 435 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 OXNAD1Q96HP4 312 aaPredicted RBP10.67□□□□□ -0.7
LINC00239-201ENST00000556973 MRGPRX2Q96LB1 330 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 WDR92Q96MX6 357 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 SPATA13Q96N96 652 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 TMEM121Q9BTD3 319 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 TEX101Q9BY14 249 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 SLC13A1Q9BZW2 595 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 ABCG8Q9H221 673 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 GBA3Q9H227 469 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 TRABDQ9H4I3 376 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 PKD2L2Q9NZM6 624 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 SPASTQ9UBP0 616 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 KLF15Q9UIH9 416 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 R3HDM2Q9Y2K5 976 aaKnown RBP10.67□□□□□ -0.7
LINC00239-201ENST00000556973 JRKLQ9Y4A0 524 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 CSNK1G3Q9Y6M4 447 aa10.67□□□□□ -0.7
LINC00239-201ENST00000556973 LRP4O75096 1905 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 K7ESM1 405 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 TPP1O14773 563 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 AQP9O43315 295 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 LIASO43766 372 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 SDC3O75056 442 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 RASGRP1O95267 797 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 TNFP01375 233 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 ADRB1P08588 477 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 ALPPL2P10696 532 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 HLA-DPA1P20036 260 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 GPR1P46091 355 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 SPINT3P49223 89 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 HK3P52790 923 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 SRP54P61011 504 aaKnown RBP10.66□□□□□ -0.7
LINC00239-201ENST00000556973 SLC1A5Q15758 541 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 PARP6Q2NL67 630 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 SIRPB2Q5JXA9 342 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 RAET1GQ6H3X3 334 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 RFLNAQ6ZTI6 216 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 LYSMD3Q7Z3D4 306 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 PHACTR4Q8IZ21 702 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 PELI3Q8N2H9 469 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 SDR16C5Q8N3Y7 309 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 FAM71DQ8N9W8 422 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 IPMKQ8NFU5 416 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 OR56A4Q8NGH8 313 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 CCDC110Q8TBZ0 833 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 LRRC45Q96CN5 670 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 DUSP23Q9BVJ7 150 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 LGR4Q9BXB1 951 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 FSD1LQ9BXM9 530 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 GPR63Q9BZJ6 419 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 CDH19Q9H159 772 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 FAM83DQ9H4H8 585 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 WDR26Q9H7D7 661 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 PHPT1Q9NRX4 125 aaPredicted RBP10.66□□□□□ -0.7
LINC00239-201ENST00000556973 RAD18Q9NS91 495 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 UCKL1Q9NWZ5 548 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 FTSJ1Q9UET6 329 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 CD84Q9UIB8 345 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 APOBEC2Q9Y235 224 aaKnown RBP10.66□□□□□ -0.7
LINC00239-201ENST00000556973 ZKSCAN5Q9Y2L8 839 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 DGKBQ9Y6T7 804 aa10.66□□□□□ -0.7
LINC00239-201ENST00000556973 GOLGA6CA6NDK9 693 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 GOLGA6BA6NDN3 693 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 TMEM202A6NGA9 273 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 F5H423 210 aaPredicted RBP10.65□□□□□ -0.7
LINC00239-201ENST00000556973 ENC1O14682 589 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 PSMD3O43242 534 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 KIF5CO60282 957 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 CEP104O60308 925 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 TRIM16O95361 564 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 AGTP01019 485 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 ATXN1LP0C7T5 689 aaKnown RBP10.65□□□□□ -0.7
LINC00239-201ENST00000556973 PIRTP0C851 137 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 GOLGA6DP0CG33 693 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 GIMD1P0DJR0 217 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 MYCLP1P12525 358 aaPredicted RBP10.65□□□□□ -0.7
LINC00239-201ENST00000556973 CTSEP14091 401 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 PSMB4P28070 264 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 HMGCLP35914 325 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 CDK3Q00526 305 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 CCDC173Q0VFZ6 552 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 CCNG2Q16589 344 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 ALG11Q2TAA5 492 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 PRRT3Q5FWE3 981 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 ZNF569Q5MCW4 686 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 DRICH1Q6PGQ1 229 aaPredicted RBP10.65□□□□□ -0.7
LINC00239-201ENST00000556973 ADAMTSL4Q6UY14 1074 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 RANBP10Q6VN20 620 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 ARHGEF18Q6ZSZ5 1173 aa10.65□□□□□ -0.7
LINC00239-201ENST00000556973 HEATR4Q86WZ0 1026 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms