RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TREML2Q5T2D2 321 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ATG16L1Q676U5 607 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 IRGCQ6NXR0 463 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 IYDQ6PHW0 289 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 WDR59Q6PJI9 974 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 CCBE1Q6UXH8 406 aaPredicted RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 H1FNTQ75WM6 255 aaPredicted RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 GPR149Q86SP6 731 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 CCDC117Q8IWD4 279 aaPredicted RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 TBC1D21Q8IYX1 336 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ABRAQ8N0Z2 381 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 RNF10Q8N5U6 811 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 FITM2Q8N6M3 262 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 CELF5Q8N6W0 485 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 FAM133AQ8N9E0 248 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 XXYLT1Q8NBI6 393 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 Q8NFD4 153 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 TRIM58Q8NG06 486 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 TCP11Q8WWU5 503 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 SEPT1Q8WYJ6 367 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 MAML1Q92585 1016 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 PTP4A1Q93096 173 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 SLC35C1Q96A29 364 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 OPTNQ96CV9 577 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 MARS2Q96GW9 593 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 BOD1Q96IK1 185 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 RPGRIP1Q96KN7 1286 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 MRGPRX4Q96LA9 322 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 DMRTA2Q96SC8 542 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 FIZ1Q96SL8 496 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 PRPF18Q99633 342 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 CHP1Q99653 195 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 NAPGQ99747 312 aaPredicted RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 ACAT2Q9BWD1 397 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 IFIH1Q9BYX4 1025 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 ABHD16BQ9H3Z7 469 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 AZI2Q9H6S1 392 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 LZTFL1Q9NQ48 299 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 PRDM8Q9NQV8 689 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ZNF302Q9NR11 478 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 DECR2Q9NUI1 292 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 AGPAT5Q9NUQ2 364 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 TBCCD1Q9NVR7 557 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 WRAP73Q9P2S5 460 aaPredicted RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 HSFX1Q9UBD0 423 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 CHORDC1Q9UHD1 332 aaPredicted RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 CPA4Q9UI42 421 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 KCNE5Q9UJ90 142 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 PCDHA3Q9Y5H8 950 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 PSAT1Q9Y617 370 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 IGKV6D-21A0A0A0MT36 114 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 TRIM43BA6NCK2 446 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 LRRC53A6NM62 1247 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 CCDC169A6NNP5 214 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 VILLO15195 856 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 CLIC2O15247 247 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 SOCS5O75159 536 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 ZFPL1O95159 310 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 GPANK1O95872 356 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 CLEC3BP05452 202 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 HOXC6P09630 235 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 SBK3P0C264 359 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 HKR1P10072 659 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 UCHL3P15374 230 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 TBXAS1P24557 533 aaPredicted RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 PSMA4P25789 261 aaKnown RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 GTF2H1P32780 548 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 RGS2P41220 211 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 PRKCIP41743 596 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 MAGEA1P43355 309 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 NAMPTP43490 491 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 FMO5P49326 533 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 CYP2J2P51589 502 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 VAMP7P51809 220 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 ZNF41P51814 821 aaPredicted RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 POLGP54098 1239 aaPredicted RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 PEX3P56589 373 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 AP2B1P63010 937 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 BLOC1S1P78537 153 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 PRKCEQ02156 737 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 CNTN2Q02246 1040 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 CKAP4Q07065 602 aaKnown RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 GALNT2Q10471 571 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 SLC14A1Q13336 389 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 TMED1Q13445 227 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 PRPF4BQ13523 1007 aaKnown RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 MTF1Q14872 753 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 TBCEQ15813 527 aaPredicted RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 CYP2A13Q16696 494 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 WHAMMP3Q1A5X7 153 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 ANKDD1AQ495B1 522 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 SPDYE7PQ495Y7 208 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 ZC2HC1CQ53FD0 456 aaPredicted RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 ZNF569Q5MCW4 686 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 UTP14CQ5TAP6 766 aaKnown RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 ATPAF1Q5TC12 328 aaPredicted RBP5.27□□□□□ -1.57
SRP54-211ENST00000556445 METTL7BQ6UX53 244 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 SEPT14Q6ZU15 432 aa5.27□□□□□ -1.57
SRP54-211ENST00000556445 DENND5BQ6ZUT9 1274 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms