RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MLNP12872 115 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 NPY2RP49146 381 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 SPINT3P49223 89 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 MSLNQ13421 630 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 IRF4Q15306 451 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 WSCD2Q2TBF2 565 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 BBS9Q3SYG4 887 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 KDM7AQ6ZMT4 941 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 MPP5Q8N3R9 675 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 OR13C4Q8NGS5 318 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 AP2M1Q96CW1 435 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 RIOK2Q9BVS4 552 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 KCNH6Q9H252 994 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 MBNL1Q9NR56 388 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 CHRAC1Q9NRG0 131 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 CACNA1IQ9P0X4 2223 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 H0Y8X5 98 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 SMAPO00193 183 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 FPGTO14772 594 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 LDB2O43679 373 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 BANF1O75531 89 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 BPIP17213 487 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 ADRA1DP25100 572 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 NUDT1P36639 197 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 ARL4CP56559 192 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 PDE1BQ01064 536 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 HLTFQ14527 1009 aaKnown RBP eCLIP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 STAT4Q14765 748 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 HIF1AQ16665 826 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 DNAJC21Q5F1R6 531 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 PCID2Q5JVF3 399 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 HP1BP3Q5SSJ5 553 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 FNBP1LQ5T0N5 605 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 RAET1GQ6H3X3 334 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 LAYNQ6UX15 382 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 TECPR1Q7Z6L1 1165 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 PDIK1LQ8N165 341 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 GPR26Q8NDV2 337 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 DNAJC1Q96KC8 554 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 ABCG8Q9H221 673 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 FAM83DQ9H4H8 585 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 RRAGDQ9NQL2 400 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 IL17CQ9P0M4 197 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 TCAF1Q9Y4C2 921 aa14.01□□□□□ -0.17
VIPAS39-208ENST00000556412 SDR42E2A6NKP2 422 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 ZNF140P52738 457 aaPredicted RBP14□□□□□ -0.17
VIPAS39-208ENST00000556412 LAMB3Q13751 1172 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 FAM151BQ6UXP7 276 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 CBARPQ8N350 705 aaPredicted RBP14□□□□□ -0.17
VIPAS39-208ENST00000556412 TP53I13Q8NBR0 393 aaPredicted RBP14□□□□□ -0.17
VIPAS39-208ENST00000556412 PLA2G15Q8NCC3 412 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 FBXO25Q8TCJ0 367 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 ASB12Q8WXK4 309 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 ART4Q93070 314 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 CENPTQ96BT3 561 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 KLF6Q99612 283 aaPredicted RBP14□□□□□ -0.17
VIPAS39-208ENST00000556412 ORAI3Q9BRQ5 295 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 SPATA16Q9BXB7 569 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 FRMD8Q9BZ67 464 aaPredicted RBP14□□□□□ -0.17
VIPAS39-208ENST00000556412 TM9SF3Q9HD45 589 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 FAM114A2Q9NRY5 505 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 TMEM74BQ9NUR3 256 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 FKBPLQ9UIM3 349 aa14□□□□□ -0.17
VIPAS39-208ENST00000556412 C10orf142B7Z368 130 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 K7ESM1 405 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 TP73O15350 636 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 BCAT2O15382 392 aaPredicted RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 GNSP15586 552 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 IGFALSP35858 605 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 SPAM1P38567 509 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 GPR1P46091 355 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 DRG2P55039 364 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 CAV1Q03135 178 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 DHX9Q08211 1270 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 INPP5AQ14642 412 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 SMAD1Q15797 465 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 CCDC6Q16204 474 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 MSS51Q4VC12 460 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 TSTD2Q5T7W7 516 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 CES3Q6UWW8 571 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 PTAR1Q7Z6K3 402 aaPredicted RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 CCDC25Q86WR0 208 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 NRSN1Q8IZ57 195 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 PELI3Q8N2H9 469 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 DNASE2BQ8WZ79 361 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 ZNF778Q96MU6 729 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 LENG8Q96PV6 779 aaPredicted RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 RANBP9Q96S59 729 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 AGAP2Q99490 1192 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 TRIM56Q9BRZ2 755 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 SEMA4AQ9H3S1 761 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 RAD18Q9NS91 495 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 SLC2A6Q9UGQ3 507 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 RAPGEFL1Q9UHV5 662 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 OR1A2Q9Y585 309 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 V9GYY5 206 aaPredicted RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 GLYATL1P3A0A0U1RQE8 302 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 RGSL1A5PLK6 1076 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 POM121BA6NF01 834 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms