RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TNS3Q68CZ2 1445 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 ANKRD30BQ9BXX2 1392 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 VWA3AA6NCI4 1184 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 CBY3A6NI87 242 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 FAM90A7PA6NKC0 464 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 FAM90A22PA8MWA6 464 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 FAM90A12PA8MX19 464 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 FAM90A23PA8MXZ1 464 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 KLK10O43240 276 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 LMX1BO60663 402 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 MTA2O94776 668 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 KDM4BO94953 1096 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 NDUFB4O95168 129 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 CLDN14O95500 239 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 CNPP09543 421 aaKnown RBP5.09□□□□□ -1.59
PRPF39-209ENST00000556353 NLRP5P59047 1200 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 ARL16Q0P5N6 197 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 TROAPQ12815 778 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 TNFAIP1Q13829 316 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 NAA25Q14CX7 972 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 SOWAHAQ2M3V2 549 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 STPG1Q5TH74 334 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 MOB3CQ70IA8 216 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 PARP16Q8N5Y8 322 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 MAB21L3Q8N8X9 362 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 GJC3Q8NFK1 279 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 CREB3L4Q8TEY5 395 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 CCT6BQ92526 530 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 LRRC59Q96AG4 307 aaKnown RBP5.09□□□□□ -1.59
PRPF39-209ENST00000556353 COG8Q96MW5 612 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 ZNF224Q9NZL3 707 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 SLC9A2Q9UBY0 812 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 SBF2Q86WG5 1849 aa5.09□□□□□ -1.6
PRPF39-209ENST00000556353 RGPD1P0DJD0 1748 aa5.09□□□□□ -1.6
PRPF39-209ENST00000556353 LMO7Q8WWI1 1683 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 TULP4Q9NRJ4 1543 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 KLRF2D3W0D1 207 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 ZIC3O60481 467 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 TIPRLO75663 272 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 TRAPPC10P48553 1259 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 NR1H2P55055 460 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 OS9Q13438 667 aaPredicted RBP5.08□□□□□ -1.6
PRPF39-209ENST00000556353 AMZ1Q400G9 498 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 C17orf99Q6UX52 265 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 HERC6Q8IVU3 1022 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 DCUN1D3Q8IWE4 304 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 STAMQ92783 540 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 ERGIC1Q969X5 290 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 ZC3HAV1LQ96H79 300 aaKnown RBP5.08□□□□□ -1.6
PRPF39-209ENST00000556353 C3orf30Q96M34 536 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 CSF3RQ99062 836 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 EBF2Q9HAK2 575 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 STK26Q9P289 416 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 SIX4Q9UIU6 781 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 CDC14AQ9UNH5 594 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 AKAP12Q02952 1782 aa5.08□□□□□ -1.6
PRPF39-209ENST00000556353 DHX57Q6P158 1386 aaKnown RBP5.07□□□□□ -1.6
PRPF39-209ENST00000556353 ATXN2Q99700 1313 aaKnown RBP5.07□□□□□ -1.6
PRPF39-209ENST00000556353 NUP188Q5SRE5 1749 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 A0A0U1RQF3 1178 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 PABPN1LA6NDY0 278 aaKnown RBP5.07□□□□□ -1.6
PRPF39-209ENST00000556353 HSPB2A8KAH6 182 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 XPNPEP2O43895 674 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 TSPAN3O60637 253 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 SLC2A4P14672 509 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 GPTP24298 496 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 ARL4CP56559 192 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 OASLQ15646 514 aaKnown RBP5.07□□□□□ -1.6
PRPF39-209ENST00000556353 HSPB2Q16082 182 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 ATP13A5Q4VNC0 1218 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 PPP6R3Q5H9R7 873 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-209ENST00000556353 FAM122CQ6P4D5 195 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 SMIM29Q86T20 159 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 UHRF2Q96PU4 802 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 NOX4Q9NPH5 578 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 VDAC3Q9Y277 283 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 A3GALT2U3KPV4 340 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 PIK3C2AO00443 1686 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 RREB1Q92766 1687 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 LRP5O75197 1615 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 TRPM1Q7Z4N2 1603 aa5.07□□□□□ -1.6
PRPF39-209ENST00000556353 ANKARQ7Z5J8 1434 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 CEP350Q5VT06 3117 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 NPHP3Q7Z494 1330 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 PRR23AA6NEV1 266 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 LINC00271P0C7V0 271 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 CD58P19256 250 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 CHATP28329 748 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 STX2P32856 288 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 RHBDL3P58872 404 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 ZNF155Q12901 538 aaPredicted RBP5.06□□□□□ -1.6
PRPF39-209ENST00000556353 ZBTB17Q13105 803 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 ITGADQ13349 1161 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 C10orf62Q5T681 223 aaPredicted RBP5.06□□□□□ -1.6
PRPF39-209ENST00000556353 GDPD4Q6W3E5 623 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 SFR1Q86XK3 245 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 SUGP1Q8IWZ8 645 aaKnown RBP5.06□□□□□ -1.6
PRPF39-209ENST00000556353 KIAA2013Q8IYS2 634 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 ZNF441Q8N8Z8 693 aa5.06□□□□□ -1.6
PRPF39-209ENST00000556353 TANKQ92844 425 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms