RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 MMGT1Q8N4V1 131 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ARL14EPQ8N8R7 260 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 FAM98AQ8NCA5 519 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ZBTB44Q8NCP5 570 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 C1orf131Q8NDD1 294 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 OR6B3Q8NGW1 331 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 OR10T2Q8NGX3 314 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 CCDC26Q8TAB7 109 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 NINJ1Q92982 152 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 RSPRY1Q96DX4 576 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 PTCD3Q96EY7 689 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 HPDLQ96IR7 371 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 FNBP1Q96RU3 617 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 CYP2S1Q96SQ9 504 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 P2RY13Q9BPV8 354 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ACBD6Q9BR61 282 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 AIFM2Q9BRQ8 373 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 MED10Q9BTT4 135 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 ARRDC1-AS1Q9H2J1 176 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 PDE11AQ9HCR9 933 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 PRMT8Q9NR22 394 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 SEMA4GQ9NTN9 838 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 EXOC1Q9NV70 894 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 DDX43Q9NXZ2 648 aaKnown RBP4.11□□□□□ -1.75
ATXN3-240ENST00000556339 HSFX1Q9UBD0 423 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 GTF3C4Q9UKN8 822 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 EDARQ9UNE0 448 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 JRKLQ9Y4A0 524 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 DENND4CQ5VZ89 1909 aa4.11□□□□□ -1.75
ATXN3-240ENST00000556339 A0A087X0B3 334 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 GOLGA8KD6RF30 607 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CES2O00748 559 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 KIAA0391O15091 583 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CLIC2O15247 247 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 LRP3O75074 770 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 TACC1O75410 805 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 RPP40O75818 363 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 MATN4O95460 622 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 VNN2O95498 520 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 PRAMEF12O95522 483 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ELANEP08246 267 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 DLATP10515 647 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 EPB41P11171 864 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ARSAP15289 507 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 TRIM21P19474 475 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 DRD1P21728 446 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 BDNFP23560 247 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ADSSP30520 456 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 PRCPP42785 496 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 PDE6CP51160 858 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CYP2J2P51589 502 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 VAV2P52735 878 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CACNA2D1P54289 1103 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 HNRNPH2P55795 449 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 TNNC1P63316 161 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 HSD11B2P80365 405 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 DMWDQ09019 674 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 FCHO2Q0JRZ9 810 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CASP8Q14790 479 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 MAPRE1Q15691 268 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CCDC6Q16204 474 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ATP13A4Q4VNC1 1196 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 C10orf76Q5T2E6 689 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 EMC10Q5UCC4 262 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ALS2CLQ60I27 953 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 METRNLQ641Q3 311 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 B3GNTL1Q67FW5 361 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 LMBRD2Q68DH5 695 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 KLHL10Q6JEL2 608 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 TTI2Q6NXR4 508 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 EMBQ6PCB8 327 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CRELD2Q6UXH1 353 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 Q6ZS52 159 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 MON1AQ86VX9 555 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 WDR5BQ86VZ2 330 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 LYSMD2Q8IV50 215 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 FMNL3Q8IVF7 1028 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 BRSK2Q8IWQ3 736 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ADGRF2Q8IZF7 708 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 GPD1LQ8N335 351 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 SLC35F6Q8N357 371 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 GUF1Q8N442 669 aaKnown RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 LRRC52Q8N7C0 313 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 STKLD1Q8NE28 680 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 COG1Q8WTW3 980 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 USP13Q92995 863 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CD101Q93033 1021 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ATP2A3Q93084 1043 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 CCDC127Q96BQ5 260 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 LRRC3BQ96PB8 259 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ALS2CR12Q96Q35 445 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 SYT15Q9BQS2 421 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 TUBGCP2Q9BSJ2 902 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 MRI1Q9BV20 369 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 TTYH3Q9C0H2 523 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 MTMR12Q9C0I1 747 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 NACA2Q9H009 215 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 LINC00597Q9H2U6 94 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 ST6GALNAC4Q9H4F1 302 aa4.1□□□□□ -1.75
ATXN3-240ENST00000556339 KIF9Q9HAQ2 790 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms