RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 RWDD4Q6NW29 188 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 DNAJC24Q6P3W2 148 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 LRRC31Q6UY01 552 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CHST9Q7L1S5 443 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 BHLHA9Q7RTU4 235 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF571Q7Z3V5 609 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 ZDHHC17Q8IUH5 632 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CHPFQ8IZ52 775 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SCML4Q8N228 414 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SPEM1Q8N4L4 309 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 DEFB119Q8N690 84 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 OR14K1Q8NGZ2 314 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CCDC26Q8TAB7 109 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 JOSD2Q8TAC2 188 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 GANCQ8TET4 914 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 HMGB4Q8WW32 186 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SORCS1Q8WY21 1168 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 GFM2Q969S9 779 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CLDN23Q96B33 292 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 NEIL1Q96FI4 390 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 MSANTD3Q96H12 275 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 AHCYL2Q96HN2 611 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 PIWIL1Q96J94 861 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 HIST1H2AHQ96KK5 128 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 RPRD1AQ96P16 312 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 LRRC37BQ96QE4 947 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 LMF1Q96S06 567 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 HIST1H2AJQ99878 128 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 DDX23Q9BUQ8 820 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 BDH2Q9BUT1 245 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 EDEM3Q9BZQ6 932 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 TKTL2Q9H0I9 626 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 C12orf65Q9H3J6 166 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 SEC61A2Q9H9S3 476 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 ABCB8Q9NUT2 735 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 AIPL1Q9NZN9 384 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 NOCTQ9UK39 431 aaKnown RBP4.78□□□□□ -1.64
ATXN3-237ENST00000556274 RAB23Q9ULC3 237 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 VANGL2Q9ULK5 521 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 DAAM1Q9Y4D1 1078 aa4.78□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SHISA7A6NL88 538 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SIGLEC16A6NMB1 481 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 PRRT4C9JH25 899 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 AKR1B15C9JRZ8 316 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 ARHGAP6O43182 974 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 DAPK3O43293 454 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SYNCRIPO60506 623 aaKnown RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 FOXD2O60548 495 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 DAB1O75553 588 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 RNF8O76064 485 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 ALDH1A2O94788 518 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 ADCY5O95622 1261 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SERPING1P05155 500 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 PLEKP08567 350 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 UNGP13051 313 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 TNNT1P13805 278 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 HNRNPLP14866 589 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 MMP8P22894 467 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 PSMA2P25787 234 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 CD70P32970 193 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 CDH5P33151 784 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 RFC1P35251 1148 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 NNMTP40261 264 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 MAGEA9P43362 315 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 GABRB2P47870 512 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 RPL34P49207 117 aaKnown RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 DNA2P51530 1060 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SGSHP51688 502 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 ATXN1P54253 815 aaKnown RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 MANFP55145 182 aaKnown RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 ST8SIA6P61647 398 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 MRPS21P82921 87 aaKnown RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 NHLH1Q02575 133 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 PLP2Q04941 152 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 KRTAP1-1Q07627 177 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 DMWDQ09019 674 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 TCF15Q12870 199 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SRSF5Q13243 272 aaKnown RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 ZNF177Q13360 481 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 CDH18Q13634 790 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SIM2Q14190 667 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 DMC1Q14565 340 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 MEA1Q16626 185 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 UGT8Q16880 541 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 GEN1Q17RS7 908 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SLC25A52Q3SY17 297 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 FBXO43Q4G163 708 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 RAB6CQ53S08 254 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 EOGTQ5NDL2 527 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 RABGAP1LQ5R372 815 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 NADSYN1Q6IA69 706 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 ANO7Q6IWH7 933 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 MSANTD2Q6P1R3 559 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 WDR59Q6PJI9 974 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 OLFML1Q6UWY5 402 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 KIAA1324Q6UXG2 1013 aaKnown RBP4.77□□□□□ -1.65
ATXN3-237ENST00000556274 SLC26A9Q7LBE3 791 aa4.77□□□□□ -1.65
ATXN3-237ENST00000556274 CIR1Q86X95 450 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms