RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 TSPAN33Q86UF1 283 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 SYT2Q8N9I0 419 aaPredicted RBP4.45□□□□□ -1.7
KTN1-222ENST00000555506 POMGNT2Q8NAT1 580 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 AGBL3Q8NEM8 1001 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 PRSS3P2Q8NHM4 247 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 ERGIC1Q969X5 290 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 CNDP2Q96KP4 475 aaKnown RBP4.45□□□□□ -1.7
KTN1-222ENST00000555506 GCNAQ96QF7 691 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 GFM1Q96RP9 751 aaKnown RBP4.45□□□□□ -1.7
KTN1-222ENST00000555506 ABHD1Q96SE0 405 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 POLDIP3Q9BY77 421 aaKnown RBP4.45□□□□□ -1.7
KTN1-222ENST00000555506 OSGEPL1Q9H4B0 414 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 LTB4R2Q9NPC1 389 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 FZD3Q9NPG1 666 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 MKKSQ9NPJ1 570 aaPredicted RBP4.45□□□□□ -1.7
KTN1-222ENST00000555506 RAI2Q9Y5P3 530 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 STON1Q9Y6Q2 735 aa4.45□□□□□ -1.7
KTN1-222ENST00000555506 C1orf226A1L170 272 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 H7C0S8 307 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 GPTP24298 496 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 ACADLP28330 430 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 RASSF2P50749 326 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 SELENOVP59797 346 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 ST3GAL1Q11201 340 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 C15orf59Q2T9L4 293 aaPredicted RBP4.44□□□□□ -1.7
KTN1-222ENST00000555506 Q4G0T1 1027 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 ANKRD54Q6NXT1 300 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 PARM1Q6UWI2 310 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 DPPA4Q7L190 304 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 APPL2Q8NEU8 664 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 LRRC59Q96AG4 307 aaKnown RBP4.44□□□□□ -1.7
KTN1-222ENST00000555506 MOAP1Q96BY2 351 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 COQ8BQ96D53 544 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 ZNF778Q96MU6 729 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 ZMAT2Q96NC0 199 aaKnown RBP4.44□□□□□ -1.7
KTN1-222ENST00000555506 TRMOQ9BU70 441 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 KIFC3Q9BVG8 833 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 MRPL1Q9BYD6 325 aaKnown RBP4.44□□□□□ -1.7
KTN1-222ENST00000555506 KRTAP4-4Q9BYR3 166 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 KLHL4Q9C0H6 718 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 NDST4Q9H3R1 872 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 ESRP2Q9H6T0 727 aaKnown RBP4.44□□□□□ -1.7
KTN1-222ENST00000555506 GPR108Q9NPR9 543 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 HINT3Q9NQE9 182 aaKnown RBP4.44□□□□□ -1.7
KTN1-222ENST00000555506 DECR2Q9NUI1 292 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 ARHGEF38Q9NXL2 777 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 TAB2Q9NYJ8 693 aa4.44□□□□□ -1.7
KTN1-222ENST00000555506 EXO1Q9UQ84 846 aaKnown RBP4.44□□□□□ -1.7
KTN1-222ENST00000555506 LOC100509620A0A075B734 347 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 A0A1W2PR77 199 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 LRRC72A6NJI9 287 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 VCYO14598 125 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ADAMDEC1O15204 470 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 LDB2O43679 373 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ZC3H11AO75152 810 aaKnown RBP eCLIP4.43□□□□□ -1.7
KTN1-222ENST00000555506 GPC4O75487 556 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 FTCDO95954 541 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 HIST1H2ABP04908 130 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ANXA7P20073 488 aaKnown RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 HIST1H2ADP20671 130 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 GNLYP22749 145 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 KELP23276 732 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 TBXAS1P24557 533 aaPredicted RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 PRCPP42785 496 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ALDH7A1P49419 539 aaKnown RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 SSBP2P81877 361 aaPredicted RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 ADORA2A-AS1P86434 159 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 BAATQ14032 418 aaPredicted RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 NEDD9Q14511 834 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 TRIP6Q15654 476 aaKnown RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 EZH2Q15910 746 aaKnown RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 KYNUQ16719 465 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 MMEL1Q495T6 779 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 KRT79Q5XKE5 535 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ZNF626Q68DY1 528 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 METTL2BQ6P1Q9 378 aaKnown RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 SLC2A7Q6PXP3 512 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 HIST3H2AQ7L7L0 130 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 TRAPPC11Q7Z392 1133 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 PALB2Q86YC2 1186 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ARRDC2Q8TBH0 407 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 TRPC4APQ8TEL6 797 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 PIGOQ8TEQ8 1089 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 METTL2AQ96IZ6 378 aaKnown RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 ACOX2Q99424 681 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 PAFAH2Q99487 392 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 PCGF1Q9BSM1 259 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 SLC29A3Q9BZD2 475 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 OR10A4Q9H209 315 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 RABEP2Q9H5N1 569 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ZCCHC17Q9NP64 241 aaKnown RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 NRIP3Q9NQ35 241 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 CCDC177Q9NQR7 707 aaPredicted RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 RNF7Q9UBF6 113 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 ZHX1Q9UKY1 873 aaPredicted RBP4.43□□□□□ -1.7
KTN1-222ENST00000555506 TMEM272A0A1B0GTI8 110 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 hCG_1809904A0A1W2PP81 198 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 A0A1W2PPE2 198 aa4.43□□□□□ -1.7
KTN1-222ENST00000555506 A0A1W2PR64 198 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms