RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 LY6G6EA0A0G2JKS1 128 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 FAM149AA5PLN7 773 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 GOLGA6CA6NDK9 693 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 NEMP2A6NFY4 417 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 APOC4-APOC2K7ER74 178 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 YY2O15391 372 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 APOC2P02655 101 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 GOLGA6DP0CG33 693 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 NFKBIAP25963 317 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 HTR1BP28222 390 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 POLD2P49005 469 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 HK3P52790 923 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 RPL26P61254 145 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 OTUD4Q01804 1114 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CDK18Q07002 472 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ESRP1Q6NXG1 681 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SYCE1Q8N0S2 351 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 BTN2A2Q8WVV5 523 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 HTR3CQ8WXA8 447 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 EID2BQ96D98 161 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 WDR92Q96MX6 357 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 QKIQ96PU8 341 aaKnown RBP eCLIP12.4□□□□□ -0.425e-14■■■■■ 46.8
TRAPPC6B-205ENST00000555269 LRRC61Q9BV99 259 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 GOLGA6AQ9NYA3 693 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 NLGN3Q9NZ94 848 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SPASTQ9UBP0 616 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 KLQ9UEF7 1012 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 APOBEC3BQ9UH17 382 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 MOSPD1Q9UJG1 213 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 RPL26L1Q9UNX3 145 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 EFR3BQ9Y2G0 817 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CSNK1G3Q9Y6M4 447 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 U3KQA8 63 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ANKRD36A6QL64 1941 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 AKAP13Q12802 2813 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 LRRK1Q38SD2 2015 aa12.4□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TPRP12270 2363 aaKnown RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TCRBV7S2A1N4TA0A589 114 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 FAM221BA6H8Z2 402 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CAPN8A6NHC0 703 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HACD1B0YJ81 288 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 C1QTNF9BB2RNN3 333 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 H3BM21 787 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PSMD11O00231 422 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ARHGAP6O43182 974 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TNFP01375 233 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HOXC4P09017 264 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 NUDT7P0C024 238 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 C1QTNF9P0C862 333 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CTSEP14091 401 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 NFKB1P19838 968 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CA4P22748 312 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PTPN7P35236 360 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ACADVLP49748 655 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 STC1P52823 247 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 EIF3EP60228 445 aaKnown RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 XRCC4Q13426 336 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 NOMO1Q15155 1222 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HEATR4Q86WZ0 1026 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TXLNBQ8N3L3 684 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RNF10Q8N5U6 811 aaKnown RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 UBL4BQ8N7F7 174 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 OR56A4Q8NGH8 313 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 AP2M1Q96CW1 435 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 OXNAD1Q96HP4 312 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HES6Q96HZ4 224 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 WDR24Q96S15 920 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RIOK2Q9BVS4 552 aaKnown RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TEX101Q9BY14 249 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SUDS3Q9H7L9 328 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 KLHL8Q9P2G9 620 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TMEM98Q9Y2Y6 226 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 MSRB2Q9Y3D2 182 aa12.39□□□□□ -0.43
TRAPPC6B-205ENST00000555269 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RFPL3O75679 317 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TJP3O95049 919 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RASGRP1O95267 797 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SOD1P00441 154 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CEACAM5P06731 702 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RBP3P10745 1247 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ACP1P24666 158 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CETN2P41208 172 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 GPR1P46091 355 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 WNT3AP56704 352 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 KIAA1024LP59773 190 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CCZ1BP86790 482 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 DAB2P98082 770 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HS1BP3Q53T59 392 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RAET1GQ6H3X3 334 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 DARS2Q6PI48 645 aaKnown RBP12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 KDELC1Q6UW63 502 aa12.38□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CCNI2Q6ZMN8 369 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms