RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 IGSF8Q969P0 613 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 URB1-AS1Q96HZ7 61 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 LRFN5Q96NI6 719 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 ACOX2Q99424 681 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 SH3GL2Q99962 352 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 PLK3Q9H4B4 646 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 SETD4Q9NVD3 440 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 CHORDC1Q9UHD1 332 aaPredicted RBP5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 RCOR1Q9UKL0 485 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 FZD10Q9ULW2 581 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 NENFQ9UMX5 172 aa5.5□□□□□ -1.53
CKS1BP1-201ENST00000555221 SETD1BQ9UPS6 1966 aaKnown RBP5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 A0A1B0GVM2 712 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 BECN2A8MW95 431 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 VCYO14598 125 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 GPC4O75487 556 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 TPPPO94811 219 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 LCATP04180 440 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 HIST1H2ABP04908 130 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 HIST1H2ADP20671 130 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 PIGAP37287 484 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 SLC15A1P46059 708 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 NUDT6P53370 316 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 MFAP4P55083 255 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 TAS2R40P59535 323 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 TRAF1Q13077 416 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 NTRK2Q16620 822 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 ODF3L2Q3SX64 289 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 FNBP1LQ5T0N5 605 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 PMS2CLQ68D20 193 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 HIST2H2BCQ6DN03 193 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 HIST2H2BDQ6DRA6 164 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 C11orf87Q6NUJ2 197 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 ANKRD54Q6NXT1 300 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 TMCO3Q6UWJ1 677 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 DLK2Q6UY11 383 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 CFAP77Q6ZQR2 320 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 HIST3H2AQ7L7L0 130 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 PRPF39Q86UA1 669 aaKnown RBP5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 TMTC2Q8N394 836 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 SPATA6LQ8N4H0 392 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 AADATQ8N5Z0 425 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 LSMEM1Q8N8F7 131 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 POC5Q8NA72 575 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 HMCESQ96FZ2 354 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 RBM38Q9H0Z9 239 aaKnown RBP5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 LTB4R2Q9NPC1 389 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 MRPL15Q9P015 296 aaKnown RBP5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 UBA2Q9UBT2 640 aaPredicted RBP5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 FBXW11Q9UKB1 542 aa5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 R3HDM2Q9Y2K5 976 aaKnown RBP5.49□□□□□ -1.53
CKS1BP1-201ENST00000555221 ZNF644Q9H582 1327 aaPredicted RBP5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 IGHV4-28A0A0C4DH34 117 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 PLOD3O60568 738 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 PGM3O95394 542 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 FTCDO95954 541 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 CYC1P08574 325 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 NR2F1P10589 423 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 HOXB2P14652 356 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 PON1P27169 355 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 HNRNPH1P31943 449 aaKnown RBP5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 KRT20P35900 424 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 RPL3P39023 403 aaKnown RBP5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 PMS2P54278 862 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 BECN1Q14457 450 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 GPR139Q6DWJ6 353 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 KRT74Q7RTS7 529 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 EPHX4Q8IUS5 362 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 DSELQ8IZU8 1212 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 PPP1R13BQ96KQ4 1090 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 SLF1Q9BQI6 1058 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 SLC29A3Q9BZD2 475 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 PPP1R3EQ9H7J1 279 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 GIMAP4Q9NUV9 329 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 HIF1ANQ9NWT6 349 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 MORF4L1Q9UBU8 362 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 TTC7AQ9ULT0 858 aaPredicted RBP5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 CDC14AQ9UNH5 594 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 CMAHPQ9Y471 501 aa5.48□□□□□ -1.53
CKS1BP1-201ENST00000555221 C1orf226A1L170 272 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 SYNDIG1LA6NDD5 238 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 OR6C75A6NL08 312 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 B4DGG1 531 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 H3BNX3 289 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 CTDSP2O14595 271 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 TCERG1O14776 1098 aaKnown RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 TNFRSF13BO14836 293 aaPredicted RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 TIMM23O14925 209 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 OGG1O15527 345 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 RGS14O43566 566 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 UBA1P22314 1058 aaKnown RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 HOXD3P31249 432 aaPredicted RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 NR4A2P43354 598 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 RFX5P48382 616 aaPredicted RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 LMAN1P49257 510 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 IFI35P80217 286 aaPredicted RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 MRPS5P82675 430 aaKnown RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 GRIK2Q13002 908 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 GPS2Q13227 327 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 HNF4GQ14541 408 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms