RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TBC1D14Q9P2M4 693 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 TCF20Q9UGU0 1960 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 CYP17A1P05093 508 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 LPOP22079 712 aaPredicted RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 GKP32189 559 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 MAPK8P45983 427 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 SLC1A6P48664 564 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 DNAJB13P59910 316 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 TMPRSS15P98073 1019 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 STX3Q13277 289 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 TSNAXIP1Q2TAA8 658 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 ZNF697Q5TEC3 545 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 ELMSAN1Q6PJG2 1045 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 C12orf40Q86WS4 652 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 PIANPQ8IYJ0 282 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 ING5Q8WYH8 240 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 PRR11Q96HE9 360 aaPredicted RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 SLC2A11Q9BYW1 496 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 TLE6Q9H808 572 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 ACTR5Q9H9F9 607 aaPredicted RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 KCNK4Q9NYG8 393 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 HACD3Q9P035 362 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 EVLQ9UI08 416 aaPredicted RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 ACOT9Q9Y305 439 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 WNT6Q9Y6F9 365 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 LAMA3Q16787 3333 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 DOCK8Q8NF50 2099 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 NEDD8-MDP1E9PL57 170 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 ZNF197O14709 1029 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 DLX3O60479 287 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 H2AFYO75367 372 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 ALPIP09923 528 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 RALBP11234 206 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 PABPC1P11940 636 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 GRK2P25098 689 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 SKIV2L2P42285 1042 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 ABL2P42684 1182 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 ABCE1P61221 599 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 LY6G5CQ5SRR4 150 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 PIM3Q86V86 326 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 NPAS3Q8IXF0 933 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 CELF5Q8N6W0 485 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 OSCP1Q8WVF1 389 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 CHFRQ96EP1 664 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 CCDC97Q96F63 343 aaPredicted RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 LBHD1Q9BQE6 289 aaPredicted RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 SIKE1Q9BRV8 207 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 TNKS2Q9H2K2 1166 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 SFXN1Q9H9B4 322 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 IKZF3Q9UKT9 509 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 RUVBL2Q9Y230 463 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 VWA7Q9Y334 891 aa8.89□□□□□ -0.99
TDP1-210ENST00000554976 SPTBN5Q9NRC6 3674 aaKnown RBP8.89□□□□□ -0.99
TDP1-210ENST00000554976 TRIM24O15164 1050 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 COQ9O75208 318 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CYBBP04839 570 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CD1DP15813 335 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 HNF1BP35680 557 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 PRAMEP78395 509 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 IRX4P78413 519 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 NFKB2Q00653 900 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 MYLK3Q32MK0 819 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TCEAL5Q5H9L2 206 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 LIPMQ5VYY2 423 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 AP1ARQ63HQ0 302 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CCDC121Q6ZUS5 278 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 LYSMD3Q7Z3D4 306 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TXNDC5Q8NBS9 432 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 MICAL1Q8TDZ2 1067 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 RMDN1Q96DB5 314 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 PTCD3Q96EY7 689 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 ASB16Q96NS5 453 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TCF12Q99081 682 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 GDF15Q99988 308 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TRIM55Q9BYV6 548 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TM6SF2Q9BZW4 377 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 DRC3Q9H069 523 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 NKX2-4Q9H2Z4 354 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 XPR1Q9UBH6 696 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 SLC27A6Q9Y2P4 619 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 PCDHB9Q9Y5E1 797 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 OAS3Q9Y6K5 1087 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 TICRRQ7Z2Z1 1910 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 C2orf81A6NN90 581 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CAPN14A8MX76 684 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TSPAN12O95859 305 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 IGSF6O95976 241 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 ZNF37AP17032 561 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 KCNC1P48547 511 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 PRKAA2P54646 552 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 ITGA9Q13797 1035 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 GEN1Q17RS7 908 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TAF1BQ53T94 588 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 FAM78AQ5JUQ0 283 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 ARMC12Q5T9G4 340 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 RBM23Q86U06 439 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 ISCA2Q86U28 154 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 AHI1Q8N157 1196 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CBARPQ8N350 705 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms