RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 MAN1A1P33908 653 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 CYLC1P35663 651 aaPredicted RBP16.94■□□□□ 0.3
NEK9-204ENST00000554258 STAT5AP42229 794 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 ABL2P42684 1182 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 CLCN6P51797 869 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 CCZ1BP86790 482 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 CCZ1P86791 482 aaPredicted RBP16.94■□□□□ 0.3
NEK9-204ENST00000554258 C2CD6Q53TS8 623 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 EFHC1Q5JVL4 640 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 PLEKHA7Q6IQ23 1121 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 ATP6V0D2Q8N8Y2 350 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 PRMT1Q99873 361 aaKnown RBP16.94■□□□□ 0.3
NEK9-204ENST00000554258 C11orf70Q9BRQ4 267 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 MFRPQ9BY79 579 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 SPTLC3Q9NUV7 552 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 VPS51Q9UID3 782 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 TMEM59LQ9UK28 342 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 INTUQ9ULD6 942 aa16.94■□□□□ 0.3
NEK9-204ENST00000554258 HEATR9A2RTY3 570 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 ANKRD62A6NC57 917 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 KCNU1A8MYU2 1149 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 TNFP01375 233 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 MYBL1P10243 752 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 MPSTP25325 297 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 CD1CP29017 333 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 NFATC4Q14934 902 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 PPP1R15BQ5SWA1 713 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 CEACAM20Q6UY09 585 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 LINGO4Q6UY18 593 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 NYAP1Q6ZVC0 841 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 TMEM135Q86UB9 458 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 DNAAF5Q86Y56 855 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 APLFQ8IW19 511 aaPredicted RBP16.93■□□□□ 0.3
NEK9-204ENST00000554258 MMP21Q8N119 569 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 C3orf20Q8ND61 904 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 ATL2Q8NHH9 583 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 TRIM11Q96F44 468 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 HEPHQ9BQS7 1158 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 SYNCQ9H7C4 482 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 MRPL40Q9NQ50 206 aaKnown RBP16.93■□□□□ 0.3
NEK9-204ENST00000554258 RCOR3Q9P2K3 495 aaPredicted RBP16.93■□□□□ 0.3
NEK9-204ENST00000554258 SLC12A6Q9UHW9 1150 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 TMEM184BQ9Y519 407 aaPredicted RBP16.93■□□□□ 0.3
NEK9-204ENST00000554258 RPS6KL1Q9Y6S9 549 aa16.93■□□□□ 0.3
NEK9-204ENST00000554258 CDC14CA4D256 554 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 SIGLEC16A6NMB1 481 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 LRCH4O75427 683 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 TM7SF2O76062 418 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 CYP1A2P05177 515 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 H2AFZP0C0S5 128 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 THRAP10827 490 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 F8A1P23610 371 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 DNA2P51530 1060 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 YWHAZP63104 245 aaKnown RBP16.92■□□□□ 0.3
NEK9-204ENST00000554258 IRF4Q15306 451 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 TAF5Q15542 800 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 FBXL22Q6P050 247 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 H2AFVQ71UI9 128 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 GDF7Q7Z4P5 450 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 ESX1Q8N693 406 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 BMPERQ8N8U9 685 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 TP53I13Q8NBR0 393 aaPredicted RBP16.92■□□□□ 0.3
NEK9-204ENST00000554258 FAM149B1Q96BN6 582 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 ARHGEF26Q96DR7 871 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 PDXPQ96GD0 296 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 SLC2A13Q96QE2 648 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 PSMB7Q99436 277 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 ZPBPQ9BS86 351 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 REXO2Q9Y3B8 237 aaKnown RBP16.92■□□□□ 0.3
NEK9-204ENST00000554258 ANKRD36A6QL64 1941 aa16.92■□□□□ 0.3
NEK9-204ENST00000554258 A6NCN8 305 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 C16orf96A6NNT2 1141 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 HSF2BPO75031 334 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 CBX6O95503 412 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 HOXB4P17483 251 aaPredicted RBP16.91■□□□□ 0.3
NEK9-204ENST00000554258 DLSTP36957 453 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 IRAK1P51617 712 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 MAZP56270 477 aaKnown RBP16.91■□□□□ 0.3
NEK9-204ENST00000554258 MAMLD1Q13495 774 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 ELOAQ14241 798 aaKnown RBP16.91■□□□□ 0.3
NEK9-204ENST00000554258 TCEAL1Q15170 157 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 JMJD6Q6NYC1 403 aaPredicted RBP16.91■□□□□ 0.3
NEK9-204ENST00000554258 SPNS3Q6ZMD2 512 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 ZNF438Q7Z4V0 828 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 KIAA1524Q8TCG1 905 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 SLC25A23Q9BV35 468 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 TRIM62Q9BVG3 475 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 PACSIN1Q9BY11 444 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 TRIM55Q9BYV6 548 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 ZDHHC6Q9H6R6 413 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 POPDC2Q9HBU9 364 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 PCDHA13Q9Y5I0 950 aa16.91■□□□□ 0.3
NEK9-204ENST00000554258 ANKUB1A6NFN9 424 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 PRSS44E7EML9 344 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 KRT86O43790 486 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 MMP20O60882 483 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 TMEM253P0C7T8 217 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 MAGEA1P43355 309 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms