RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MLYCDO95822 493 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 CNPP09543 421 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 WEE2P0C1S8 567 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 ATP6V1B1P15313 513 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 HOXB9P17482 250 aaPredicted RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 PSMC2P35998 433 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 CDKN1AP38936 164 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 HADHAP40939 763 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 PIK3CAP42336 1068 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 CLK1P49759 484 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 RARSP54136 660 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 OAZ1P54368 228 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 UBXN2AP68543 259 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 KRT83P78385 493 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 TMF1P82094 1093 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 ADORA2A-AS1P86434 159 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 UBXN1Q04323 297 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 ACVR2BQ13705 512 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 DCTN1Q14203 1278 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 MED22Q15528 200 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 C5orf22Q49AR2 442 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 SYTL3Q4VX76 610 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 DNAJC21Q5F1R6 531 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 XKR9Q5GH70 373 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 ZNF484Q5JVG2 852 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 FAM171A1Q5VUB5 890 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 UNQ6126/PRO20091Q6UXV3 157 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 BTN2A1Q7KYR7 527 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 LRRC8DQ7L1W4 858 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 TRIM74Q86UV6 250 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 TRIM73Q86UV7 250 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 PALB2Q86YC2 1186 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 CCDC170Q8IYT3 715 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 CARNMT1Q8N4J0 409 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 AVL9Q8NBF6 648 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 GOT1L1Q8NHS2 421 aaPredicted RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 ETNPPLQ8TBG4 499 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 NEK9Q8TD19 979 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 SH3KBP1Q96B97 665 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 SDCCAG3Q96C92 435 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 FEM1CQ96JP0 617 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 MYCBPQ99417 103 aaPredicted RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 GPATCH1Q9BRR8 931 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 MRPL9Q9BYD2 267 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 OR10A4Q9H209 315 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 MROH8Q9H579 483 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 EBF2Q9HAK2 575 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 CLK4Q9HAZ1 481 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 G6PC2Q9NQR9 355 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 PCDHB16Q9NRJ7 776 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 LIN7CQ9NUP9 197 aaKnown RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 ARGLU1Q9NWB6 273 aaPredicted RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 TAB2Q9NYJ8 693 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 TAS2R10Q9NYW0 307 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 MTRRQ9UBK8 725 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 SEL1LQ9UBV2 794 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 RASAL2Q9UJF2 1139 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 ACAD8Q9UKU7 415 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 BAG5Q9UL15 447 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 CORO1CQ9ULV4 474 aaPredicted RBP2.37□□□□□ -2.03
SRP54-204ENST00000553923 CNTN6Q9UQ52 1028 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 NAALADL1Q9UQQ1 740 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 NFS1Q9Y697 457 aa2.37□□□□□ -2.03
SRP54-204ENST00000553923 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 TAF4O00268 1085 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 RTCAO00442 366 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 EXTL3O43909 919 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 DIAPH2O60879 1101 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 GUCY1B2O75343 617 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ERAL1O75616 437 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 GGPS1O95749 300 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 F9P00740 461 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 HLA-DQA2P01906 255 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 CRYAAP02489 173 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 CLEC3BP05452 202 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ADRB2P07550 413 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 UBL4AP11441 157 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PRPH2P23942 346 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 GSTM2P28161 218 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ACSL1P33121 698 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 RGS2P41220 211 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PCP4P48539 62 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 CDK7P50613 346 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ZNF131P52739 623 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ZNF132P52740 706 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PSMC6P62333 389 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PHEXP78562 749 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 NEXNQ0ZGT2 675 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 STK4Q13043 487 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 SCARB2Q14108 478 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 SMC1AQ14683 1233 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 COG2Q14746 738 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 TBRG1Q3YBR2 411 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 TRIM60Q495X7 471 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 TTC22Q5TAA0 569 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PLA2G4FQ68DD2 849 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ZNF772Q68DY9 489 aaPredicted RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 RPUSD3Q6P087 351 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 KIAA1324Q6UXG2 1013 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 GDPD4Q6W3E5 623 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms