RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GSG1LQ6UXU4 331 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 C9orf139Q6ZV77 190 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 EXOC8Q8IYI6 725 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 LMNTD1Q8N9Z9 388 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 THAP6Q8TBB0 222 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 SECTM1Q8WVN6 248 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 RFFLQ8WZ73 363 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 NR4A3Q92570 626 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 SGCDQ92629 289 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 FAM149B1Q96BN6 582 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 CDCA5Q96FF9 252 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 HARBI1Q96MB7 349 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 TMEM68Q96MH6 324 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 MPHOSPH8Q99549 860 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 TMEM47Q9BQJ4 181 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 NDST4Q9H3R1 872 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 UNC45AQ9H3U1 944 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 PPP1R3EQ9H7J1 279 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 PLEKHA5Q9HAU0 1116 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 PREBQ9HCU5 417 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 NOX4Q9NPH5 578 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 GPR108Q9NPR9 543 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 POU2F3Q9UKI9 436 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 ACSL5Q9ULC5 683 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 AMDHD2Q9Y303 409 aa3.28□□□□□ -1.88
VRK1-202ENST00000553683 A0A0G2JPF8 293 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 FAM172BPA6NC97 362 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 HNRNPCL3B7ZW38 293 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 HNRNPCL1O60812 293 aaKnown RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 DDNO94850 711 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 FTCDO95954 541 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 IGLV2-11P01706 119 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 HNRNPCL4P0DMR1 293 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 UBL4AP11441 157 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 S1PR1P21453 382 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 IL15P40933 162 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 CTCFP49711 727 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 CSNK2A1P68400 391 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 PITX1P78337 314 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 ZBED6P86452 979 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 SLC20A2Q08357 652 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 ACSM2AQ08AH3 577 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 GAGE5Q13069 117 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 GAGE6Q13070 117 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 FGFBP1Q14512 234 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 SOWAHCQ53LP3 525 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 HSP90AB4PQ58FF6 505 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 SLC45A4Q5BKX6 768 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 SIGIRRQ6IA17 410 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 WDR73Q6P4I2 378 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 FBXO46Q6PJ61 603 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 PQLC2Q6ZP29 291 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 ZNF771Q7L3S4 317 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 SATL1Q86VE3 508 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 TDRPQ86YL5 185 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 RNF113BQ8IZP6 322 aaKnown RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 METTL27Q8N6F8 245 aaPredicted RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 ZNF441Q8N8Z8 693 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 NAXEQ8NCW5 288 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 CSNK2A3Q8NEV1 391 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 CD101Q93033 1021 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 PPM1MQ96MI6 270 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 PDCL3Q9H2J4 239 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 SLC6A13Q9NSD5 602 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 CTNNAL1Q9UBT7 734 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 INTS6Q9UL03 887 aaKnown RBP3.27□□□□□ -1.89
VRK1-202ENST00000553683 ARHGAP26Q9UNA1 814 aa3.27□□□□□ -1.89
VRK1-202ENST00000553683 ASPDHA6ND91 283 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 A6NLC8 198 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 PAGE4O60829 102 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 DAB1O75553 588 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 CAMTA2O94983 1202 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 AFPP02771 609 aaKnown RBP3.26□□□□□ -1.89
VRK1-202ENST00000553683 CYC1P08574 325 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 ZNF182P17025 639 aaPredicted RBP3.26□□□□□ -1.89
VRK1-202ENST00000553683 CD53P19397 219 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 BDKRB2P30411 391 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 BSGP35613 385 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 EIF2S3P41091 472 aaKnown RBP3.26□□□□□ -1.89
VRK1-202ENST00000553683 TMPOP42166 694 aaKnown RBP3.26□□□□□ -1.89
VRK1-202ENST00000553683 PIP4K2AP48426 406 aaPredicted RBP3.26□□□□□ -1.89
VRK1-202ENST00000553683 TUBP50607 506 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 ZNF132P52740 706 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 TERF1P54274 439 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 NLRP5P59047 1200 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 SORDQ00796 357 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 DECR1Q16698 335 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 MYLK3Q32MK0 819 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 DPCR1Q3MIW9 517 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 ALFQ53S48 1182 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 ZNF628Q5EBL2 1059 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 BRAT1Q6PJG6 821 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 GFRALQ6UXV0 394 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 GDPD4Q6W3E5 623 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 SLC36A4Q6YBV0 504 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 QSOX2Q6ZRP7 698 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 KMT5CQ86Y97 462 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 DCUN1D3Q8IWE4 304 aa3.26□□□□□ -1.89
VRK1-202ENST00000553683 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.26□□□□□ -1.89
VRK1-202ENST00000553683 C1orf87Q8N0U7 546 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms