RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PLXNB3Q9ULL4 1909 aa13.74□□□□□ -0.21
APEX1-205ENST00000553555 C1QTNF3-AMACRE9PGA6 284 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 CD3EAPO15446 510 aaKnown RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 F7P08709 466 aaPredicted RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 XPAP23025 273 aaPredicted RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 LEPRP48357 1165 aaKnown RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 XIAPP98170 497 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 PEX6Q13608 980 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 MROH9Q5TGP6 573 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 FAM46CQ5VWP2 391 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 LRRC66Q68CR7 880 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 AFTPHQ6ULP2 937 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 TAOK1Q7L7X3 1001 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 TRMT11Q7Z4G4 463 aaKnown RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 SRRM1Q8IYB3 904 aaKnown RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 CBARPQ8N350 705 aaPredicted RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 ERLEC1Q96DZ1 483 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 PPP1R16AQ96I34 528 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 CATSPERZQ9NTU4 200 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 SENP1Q9P0U3 644 aa13.73□□□□□ -0.21
APEX1-205ENST00000553555 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
APEX1-205ENST00000553555 MAN2B1O00754 1011 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 RNASEH1O60930 286 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 ADAM23O75077 832 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 MT-ND3P03897 115 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 CREB1P16220 341 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 ZNF30P17039 623 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 BPIP17213 487 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 NR1D1P20393 614 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 CD72P21854 359 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 MC4RP32245 332 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 FOXN2P32314 431 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 SUOXP51687 545 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 LIMK2P53671 638 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 PTPN5P54829 565 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 MPP1Q00013 466 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 SATB1Q01826 763 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 ZP2Q05996 745 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 DNAJC3Q13217 504 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 BMPR2Q13873 1038 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 ARHGEF7Q14155 803 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 MLF2Q15773 248 aaPredicted RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 FBXO43Q4G163 708 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 FASTKD1Q53R41 847 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 MRNIPQ6NTE8 343 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 ERAP2Q6P179 960 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 FBXL19Q6PCT2 694 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 TIFABQ6ZNK6 161 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 DPPA4Q7L190 304 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 GALNT7Q86SF2 657 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 ZC3HC1Q86WB0 502 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 PBXIP1Q96AQ6 731 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 HDAC8Q9BY41 377 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 PIKFYVEQ9Y2I7 2098 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 TRPM6Q9BX84 2022 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 PLXNA2O75051 1894 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 DOCK9Q9BZ29 2069 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 HAUS5O94927 633 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 S1PR4O95977 384 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 C1SP09871 688 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 PRSS56P0CW18 603 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 OGNP20774 298 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 HPDP32754 393 aaPredicted RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 MMP12P39900 470 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 PSMD8P48556 350 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 STC1P52823 247 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 PPP2R2AP63151 447 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 CCINQ13939 588 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 SEMA3AQ14563 771 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 KIAA1211LQ6NV74 962 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 SH2D5Q6ZV89 423 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 ERN2Q76MJ5 926 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 SDCCAG8Q86SQ7 713 aaPredicted RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 LDB1Q86U70 411 aaPredicted RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 OTUD6BQ8N6M0 293 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 PNPLA1Q8N8W4 532 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 TXNDC5Q8NBS9 432 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 OR2T3Q8NH03 318 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 FAM76AQ8TAV0 307 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 SERAC1Q96JX3 654 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 RHOJQ9H4E5 214 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 DYRK4Q9NR20 520 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 FBXO6Q9NRD1 293 aaPredicted RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 SORCS3Q9UPU3 1222 aa13.72□□□□□ -0.21
APEX1-205ENST00000553555 MTO1Q9Y2Z2 717 aaKnown RBP13.72□□□□□ -0.21
APEX1-205ENST00000553555 BPTFQ12830 3046 aa13.71□□□□□ -0.21
APEX1-205ENST00000553555 A0A1W2PQF6 199 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 PLK4O00444 970 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 GAPDHSO14556 408 aaPredicted RBP13.71□□□□□ -0.22
APEX1-205ENST00000553555 SPINT1O43278 529 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 RFPL1O75677 317 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 ADH1BP00325 375 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 ADRB3P13945 408 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 BRAFP15056 766 aa13.71□□□□□ -0.22
APEX1-205ENST00000553555 COL9A1P20849 921 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms