RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 THPOP40225 353 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 ALCAMQ13740 583 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 C6orf10Q5SRN2 563 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 MIS18BP1Q6P0N0 1132 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 DEF8Q6ZN54 512 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 FAM47EQ6ZV65 393 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 CHST3Q7LGC8 479 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 RD3Q7Z3Z2 195 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 AACSQ86V21 672 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 PRIMA1Q86XR5 153 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 GPSM1Q86YR5 675 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 CAMK1DQ8IU85 385 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 EPHX4Q8IUS5 362 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 SCYL3Q8IZE3 742 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 SLC44A5Q8NCS7 719 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 OR8K5Q8NH50 307 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 BICD2Q8TD16 824 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 HASPINQ8TF76 798 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 VCPIP1Q96JH7 1222 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 SIGLEC11Q96RL6 698 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 GAD1Q99259 594 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 ACOX2Q99424 681 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 MSTO1Q9BUK6 570 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 CCDC106Q9BWC9 280 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 NPFFR1Q9GZQ6 430 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 R3HDMLQ9H3Y0 253 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 KLHL31Q9H511 634 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 SLC28A3Q9HAS3 691 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 CYSLTR2Q9NS75 346 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 ARGLU1Q9NWB6 273 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-209ENST00000553280 GDE1Q9NZC3 331 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 AMACRQ9UHK6 382 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 SOS1Q07889 1333 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-209ENST00000553280 GPR75-ASB3A0A0A6YYF3 556 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 A0A0G2JK05 382 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 A6NL46 340 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 CHL1O00533 1208 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 TLX3O43711 291 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 ZC3H11AO75152 810 aaKnown RBP eCLIP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 NDUFB4O95168 129 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 FTCDO95954 541 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 CCDC175P0C221 793 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 IFNAR1P17181 557 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 MYF6P23409 242 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 ATP5F1P24539 256 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 CTNNA1P35221 906 aaKnown RBP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 AVPR1AP37288 418 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 PRCPP42785 496 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 MSH2P43246 934 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 CDH12P55289 794 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 TMPRSS3P57727 454 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 CXCL9Q07325 125 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 FOXF2Q12947 444 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 COG2Q14746 738 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 COLEC12Q5KU26 742 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 TMEM198Q66K66 360 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF782Q6ZMW2 699 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF66Q6ZN08 573 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 PQLC2Q6ZP29 291 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 ARID3BQ8IVW6 561 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 SFTPA2Q8IWL1 248 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 SCCPDHQ8NBX0 429 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 MCUQ8NE86 351 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 TMEM163Q8TC26 289 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 TRPC4APQ8TEL6 797 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 NTN5Q8WTR8 489 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 VMP1Q96GC9 406 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 ANKRD2Q9GZV1 360 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 MKKSQ9NPJ1 570 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-209ENST00000553280 PDGFCQ9NRA1 345 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 STON1Q9Y6Q2 735 aa5.12□□□□□ -1.59
SCFD1-209ENST00000553280 LNP1A1A4G5 178 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 GAGE12JA6NER3 117 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 URADA6NGE7 173 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 PRKCGP05129 697 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 CBSLP0DN79 551 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 CPT2P23786 658 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 CBSP35520 551 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 PPP3CCP48454 512 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 MMP14P50281 582 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 GPR143P51810 404 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 MRPS21P82921 87 aaKnown RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 PPARDQ03181 441 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 DLG2Q15700 870 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 CCDC142Q17RM4 750 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 DCAF6Q58WW2 860 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 EPHA10Q5JZY3 1008 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 SIGIRRQ6IA17 410 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 MTSS1LQ765P7 747 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 DPPA4Q7L190 304 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 PATL1Q86TB9 770 aaKnown RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 MB21D2Q8IYB1 491 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 MMP21Q8N119 569 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 GUF1Q8N442 669 aaKnown RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 ZBTB8BQ8NAP8 495 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 AGBL3Q8NEM8 1001 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 PTERQ96BW5 349 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 MSI2Q96DH6 328 aaKnown RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 EGLN2Q96KS0 407 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 CEP295NLQ96MC4 621 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms