RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 Q6ZVL8 140 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 HSD11B1LQ7Z5J1 315 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 IQCHQ86VS3 1027 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 DCP2Q8IU60 420 aaKnown RBP17.18■□□□□ 0.34
ITGA5-213ENST00000553071 SYT12Q8IV01 421 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 CCNJLQ8IV13 435 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 SLC41A1Q8IVJ1 513 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 IFT20Q8IY31 132 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 TTC30BQ8N4P2 665 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 DEFB119Q8N690 84 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 SEC14L1Q92503 715 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 LRRC39Q96DD0 335 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 NUS1Q96E22 293 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 SERPINB12Q96P63 405 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 PLEKHG4BQ96PX9 1271 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 DPH5Q9H2P9 285 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 MRM3Q9HC36 420 aaKnown RBP17.18■□□□□ 0.34
ITGA5-213ENST00000553071 IL17CQ9P0M4 197 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 EIF2B4Q9UI10 523 aaKnown RBP17.18■□□□□ 0.34
ITGA5-213ENST00000553071 SPO11Q9Y5K1 396 aa17.18■□□□□ 0.34
ITGA5-213ENST00000553071 TMEM63AO94886 807 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 TSHRP16473 764 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 ETV3P41162 512 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 GRIA1P42261 906 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 PTGER3P43115 390 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 CBLBQ13191 982 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 SEPT6Q14141 434 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 TEAD4Q15561 434 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 CERCAMQ5T4B2 595 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 CAND1Q86VP6 1230 aaKnown RBP17.17■□□□□ 0.34
ITGA5-213ENST00000553071 CENPTQ96BT3 561 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 AP2M1Q96CW1 435 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 ZSCAN5AQ9BUG6 496 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 MIR1-1HGQ9H1L0 117 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 EPB41L5Q9HCM4 733 aa17.17■□□□□ 0.34
ITGA5-213ENST00000553071 A0A1B0GTW7 788 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 MROH6A6NGR9 719 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 EIF3HO15372 352 aaKnown RBP eCLIP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 BCAT2O15382 392 aaPredicted RBP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 LDB2O43679 373 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 RETP07949 1114 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 C1SP09871 688 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 AFF3P51826 1226 aaKnown RBP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 YPEL5P62699 121 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 MRPS25P82663 173 aaKnown RBP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 SLC7A5Q01650 507 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 MTM1Q13496 603 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 CUL1Q13616 776 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 NUMA1Q14980 2115 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 PTPRRQ15256 657 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 HIF1AQ16665 826 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 WSCD2Q2TBF2 565 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 ESRP1Q6NXG1 681 aaKnown RBP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 CASC4Q6P4E1 433 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 CENPUQ71F23 418 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 ZCCHC9Q8N567 271 aaKnown RBP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 MFSD2AQ8NA29 543 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 KLK6Q92876 244 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 ART4Q93070 314 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 SMIM14Q96QK8 99 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 PHACTR1Q9C0D0 580 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 AASDHPPTQ9NRN7 309 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 MTRF1LQ9UGC7 380 aaKnown RBP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 GMEB2Q9UKD1 530 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 PILRBQ9UKJ0 227 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 SMG5Q9UPR3 1016 aaKnown RBP17.16■□□□□ 0.34
ITGA5-213ENST00000553071 TCAF1Q9Y4C2 921 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 ARL5AQ9Y689 179 aa17.16■□□□□ 0.34
ITGA5-213ENST00000553071 TRPM6Q9BX84 2022 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 A6NNZ2 444 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 AURKAO14965 403 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 EPN2O95208 641 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 TTC4O95801 387 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 LMNAP02545 664 aaKnown RBP17.15■□□□□ 0.34
ITGA5-213ENST00000553071 SLC4A1P02730 911 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 HOXC4P09017 264 aaPredicted RBP17.15■□□□□ 0.34
ITGA5-213ENST00000553071 PAMP19021 973 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 ITPKAP23677 461 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 PSMA3P25788 255 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 MGAT1P26572 445 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 CD38P28907 300 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 SPAM1P38567 509 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 MAGEA3P43357 314 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 RABIFP47224 123 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 PLTPP55058 493 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 ITGA9Q13797 1035 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 FGL2Q14314 439 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 DUOXA1Q1HG43 343 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 TSTD2Q5T7W7 516 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 PNCKQ6P2M8 343 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 ZNF534Q76KX8 674 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 ARMCX6Q7L4S7 300 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 TRAM1L1Q8N609 369 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 GPR161Q8N6U8 529 aaKnown RBP17.15■□□□□ 0.34
ITGA5-213ENST00000553071 TP53I13Q8NBR0 393 aaPredicted RBP17.15■□□□□ 0.34
ITGA5-213ENST00000553071 TMEM145Q8NBT3 493 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 OR4K2Q8NGD2 314 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 RUBCNQ92622 972 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 PIGKQ92643 395 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms