RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ASIC2Q16515 512 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 ALG11Q2TAA5 492 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 BBS9Q3SYG4 887 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 PRR30Q53SZ7 412 aaPredicted RBP5.19□□□□□ -1.58
CKAP4-203ENST00000553039 RRAGBQ5VZM2 374 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 SPECC1LQ69YQ0 1117 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 NXNQ6DKJ4 435 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 XKRXQ6PP77 449 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 CHSY1Q86X52 802 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 WDR75Q8IWA0 830 aaKnown RBP5.19□□□□□ -1.58
CKAP4-203ENST00000553039 CCAR2Q8N163 923 aaKnown RBP5.19□□□□□ -1.58
CKAP4-203ENST00000553039 NXPE1Q8N323 547 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 UBR7Q8N806 425 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 ATP6V0D2Q8N8Y2 350 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 Q8NA96 180 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 OR10G6Q8NH81 332 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 CXorf40AQ8TE69 158 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 IRGQQ8WZA9 623 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 TM9SF4Q92544 642 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 STAMBPL1Q96FJ0 436 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 BTN2A3PQ96KV6 586 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 WDR92Q96MX6 357 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 CLUHP3Q96NS8 147 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 RANBP9Q96S59 729 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 BARD1Q99728 777 aaKnown RBP5.19□□□□□ -1.58
CKAP4-203ENST00000553039 MDFIQ99750 246 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 APOOQ9BUR5 198 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 TRIM62Q9BVG3 475 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 ULBP3Q9BZM4 244 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 NUCKS1Q9H1E3 243 aaKnown RBP5.19□□□□□ -1.58
CKAP4-203ENST00000553039 MCCC2Q9HCC0 563 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 LUZP4Q9P127 313 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 REV1Q9UBZ9 1251 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 STK17AQ9UEE5 414 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 USP25Q9UHP3 1055 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 KIAA1257Q9ULG3 409 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 B3GNT3Q9Y2A9 372 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 PKDREJQ9NTG1 2253 aa5.19□□□□□ -1.58
CKAP4-203ENST00000553039 CSPG4Q6UVK1 2322 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 TRBV23-1A0A0A0MS06 115 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 TRAV20A0A0B4J274 112 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 C16orf96A6NNT2 1141 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 A8MU76 341 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 B4DGG1 531 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 J3QW42 95 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 CACNB4O00305 520 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 AKAP10O43572 662 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 CLDN11O75508 207 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 CEACAM4O75871 244 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 DLGAP3O95886 979 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 MOCS2O96007 188 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ASS1P00966 412 aaKnown RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 GHRHP01286 108 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ALPPP05187 535 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 MYL1P05976 194 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 NAT2P11245 290 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 SRCP12931 536 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 GARSP41250 739 aaKnown RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 CYP2J2P51589 502 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 VAMP7P51809 220 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 CASP5P51878 434 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 NDST2P52849 883 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 RRADP55042 308 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 PDE1BQ01064 536 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 FOXM1Q08050 763 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 IL11RAQ14626 422 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 INPP5AQ14642 412 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 NFATC4Q14934 902 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 UGT8Q16880 541 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ZNF805Q5CZA5 627 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 CARD16Q5EG05 197 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 NKAIN2Q5VXU1 208 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 RAP1GAP2Q684P5 730 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ARHGAP17Q68EM7 881 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 RETSATQ6NUM9 610 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 CYB5D1Q6P9G0 228 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 WDR74Q6RFH5 385 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 DPY19L3Q6ZPD9 716 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ARHGAP22Q7Z5H3 698 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 MRGPRGQ86SM5 289 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 FJX1Q86VR8 437 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 C17orf82Q86X59 251 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 TGIF2LYQ8IUE0 185 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 MYO1HQ8N1T3 1032 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ZADH2Q8N4Q0 377 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ZNF808Q8N4W9 903 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 RBMXL3Q8N7X1 1067 aaKnown RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 BMPERQ8N8U9 685 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ZNF507Q8TCN5 953 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 PARD3BQ8TEW8 1205 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 UBE2Q2Q8WVN8 375 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 DNAJC19Q96DA6 116 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ALG14Q96F25 216 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 FAXDC2Q96IV6 333 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 PRICKLE1Q96MT3 831 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 GSDMCQ9BYG8 508 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ILKAPQ9H0C8 392 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 AGPAT3Q9NRZ7 376 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 GPR83Q9NYM4 423 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 HMGXB4Q9UGU5 601 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms