RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 XIAPP98170 497 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 IRF9Q00978 393 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 MESP2Q0VG99 397 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 PEX6Q13608 980 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 ADGRE1Q14246 886 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 ITPRIPL2Q3MIP1 535 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 CCDC153Q494R4 210 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 PREPLQ4J6C6 727 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 FNDC3BQ53EP0 1204 aaKnown RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 RBM20Q5T481 1227 aaKnown RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 RNF187Q5TA31 235 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 HECTD2Q5U5R9 776 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 FAM45BPQ6NSW5 357 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 RAPH1Q70E73 1250 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF771Q7L3S4 317 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 LDB1Q86U70 411 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 TRIM42Q8IWZ5 723 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 SMRP1Q8NCR6 262 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 FAM45AQ8TCE6 357 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 GRIN3AQ8TCU5 1115 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 HCAR2Q8TDS4 363 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 UCMAQ8WVF2 138 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 SUSD6Q92537 303 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF75CPQ92670 426 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 EID2BQ96D98 161 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 SCRN2Q96FV2 425 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 TSNARE1Q96NA8 513 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 KLHL32Q96NJ5 620 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 OMDQ99983 421 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 BPIFA1Q9NP55 256 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 CD207Q9UJ71 328 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF106Q9H2Y7 1883 aaKnown RBP12.68□□□□□ -0.38
CACNB3-223ENST00000552480 SCN8AQ9UQD0 1980 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 A0A0U1RQS6 177 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 NPIPB15A6NHN6 443 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-223ENST00000552480 PHGDHO43175 533 aaKnown RBP12.67□□□□□ -0.38
CACNB3-223ENST00000552480 LEFTY1O75610 366 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 CLDN7O95471 211 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 PROCP04070 461 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 BPGMP07738 259 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 SLC35E2BP0CK96 405 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 PRSS56P0CW18 603 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 BMP1P13497 986 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 NFKBIAP25963 317 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 TTPAP49638 278 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 PTPN5P54829 565 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 TAS2R39P59534 338 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 CACNG1Q06432 222 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 HTR4Q13639 388 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 ZRANB3Q5FWF4 1079 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 C16orf46Q6P387 395 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 CRTC1Q6UUV9 634 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 CEP97Q8IW35 865 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 CBARPQ8N350 705 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-223ENST00000552480 TTC8Q8TAM2 541 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 RAB3IL1Q8TBN0 382 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.67□□□□□ -0.38
CACNB3-223ENST00000552480 NDNQ99608 321 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 C1QTNF1Q9BXJ1 281 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 MANSC1Q9H8J5 431 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 BRD9Q9H8M2 597 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 FGFR1OP2Q9NVK5 253 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 GTSE1Q9NYZ3 720 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 DKK3Q9UBP4 350 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 ACOT9Q9Y305 439 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 USP15Q9Y4E8 981 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-223ENST00000552480 SLC30A1Q9Y6M5 507 aa12.67□□□□□ -0.38
CACNB3-223ENST00000552480 DOCK8Q8NF50 2099 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 WDR91A4D1P6 747 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 TBC1D3BA6NDS4 549 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 UPK3BL1B0FP48 263 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 UPK3BL2E5RIL1 263 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 ANHXE9PGG2 379 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 ARNTLO00327 626 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 KLF11O14901 512 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 NDUFS3O75489 264 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 KAT7O95251 611 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 APOA4P06727 396 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 CTSLP07711 333 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 CYP2A6P11509 494 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF30P17039 623 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 FDXRP22570 491 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 IGFBP4P22692 258 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 SPAM1P38567 509 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 GRIA2P42262 883 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF234Q14588 700 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF805Q5CZA5 627 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 NAIF1Q69YI7 327 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-223ENST00000552480 PSAPL1Q6NUJ1 521 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF549Q6P9A3 640 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 NUDT18Q6ZVK8 323 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 TSPAN33Q86UF1 283 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 PLD6Q8N2A8 252 aaKnown RBP12.66□□□□□ -0.38
CACNB3-223ENST00000552480 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 LPGAT1Q92604 370 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms