RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 COPG2Q9UBF2 871 aa4.12□□□□□ -1.75
LSM6P2-201ENST00000552208 MTRRQ9UBK8 725 aa4.12□□□□□ -1.75
LSM6P2-201ENST00000552208 ZNF148Q9UQR1 794 aa4.12□□□□□ -1.75
LSM6P2-201ENST00000552208 CLIC4Q9Y696 253 aa4.12□□□□□ -1.75
LSM6P2-201ENST00000552208 ZNF541Q9H0D2 1346 aa4.12□□□□□ -1.75
LSM6P2-201ENST00000552208 SMTNL1A8MU46 457 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 MAGEB17A8MXT2 336 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 B8ZZF3 427 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 CCDC188H7C350 402 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 RHODO00212 210 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ATP2A1O14983 1001 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 WDR46O15213 610 aaKnown RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ATP2C2O75185 946 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 SIX3O95343 332 aaPredicted RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 SLU7O95391 586 aaKnown RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 FDPSP14324 419 aaKnown RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ATP5F1P24539 256 aaPredicted RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 TNFSF8P32971 234 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 COMPP49747 757 aaPredicted RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 NPY4RP50391 375 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ADORA2A-AS1P86434 159 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 SORDQ00796 357 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 CFHR1Q03591 330 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 KRTAP1-1Q07627 177 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ZNF273Q14593 569 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 LPIN1Q14693 890 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 LSM12Q3MHD2 195 aaKnown RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 MMEL1Q495T6 779 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 MIDNQ504T8 468 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 CCDC92Q53HC0 331 aaPredicted RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ALG10Q5BKT4 473 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ALG10BQ5I7T1 473 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ENTPD8Q5MY95 495 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 NCAPH2Q6IBW4 605 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ANKRD54Q6NXT1 300 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 DLK2Q6UY11 383 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 PQLC2Q6ZP29 291 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 MTSS1LQ765P7 747 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 TRILQ7L0X0 811 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 EPHX4Q8IUS5 362 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ARID3BQ8IVW6 561 aaPredicted RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 DDIASQ8IXT1 998 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 RBFAQ8N0V3 343 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 PARP16Q8N5Y8 322 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 TSPAN14Q8NG11 270 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 OR8K5Q8NH50 307 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 CFAP61Q8NHU2 1237 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 LPGAT1Q92604 370 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 SARAFQ96BY9 339 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 DACH2Q96NX9 599 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 EFHD1Q9BUP0 239 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 SPATC1LQ9H0A9 340 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 TOR3AQ9H497 397 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 ESRP2Q9H6T0 727 aaKnown RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 MKKSQ9NPJ1 570 aaPredicted RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 CHCHD3Q9NX63 227 aaKnown RBP4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 SLC17A6Q9P2U8 582 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 FBXW11Q9UKB1 542 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 UTS2RQ9UKP6 389 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 LIPGQ9Y5X9 500 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 GPRASP1Q5JY77 1395 aa4.11□□□□□ -1.75
LSM6P2-201ENST00000552208 KIR2DS5A0A0G2JLQ3 304 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 TMEM202A6NGA9 273 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 KIR2DS3K7RE56 304 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 SMAD9O15198 467 aaKnown RBP4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 NARSO43776 548 aaKnown RBP4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 GPC4O75487 556 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 MTA2O94776 668 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 CLDN7O95471 211 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 MYZAPP0CAP1 466 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 ERCC2P18074 760 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 CTSWP56202 376 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 TMF1P82094 1093 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 TFF2Q03403 129 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 TUBB2AQ13885 445 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 CAPSQ13938 189 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 LETM2Q2VYF4 491 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 CERKLQ49MI3 558 aaPredicted RBP4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 ZRANB3Q5FWF4 1079 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 HECTD2Q5U5R9 776 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 IGFL4Q6B9Z1 124 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 IYDQ6PHW0 289 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 PET117Q6UWS5 81 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 FAM43BQ6ZT52 329 aaPredicted RBP4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 AMIGO2Q86SJ2 522 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 NUP93Q8N1F7 819 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 PNLDC1Q8NA58 520 aaKnown RBP4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 C8orf58Q8NAV2 365 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 MCUQ8NE86 351 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 TEKT4Q8WW24 435 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 MR1Q95460 341 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 SNX21Q969T3 373 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 HDAC11Q96DB2 347 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 CDHR1Q96JP9 859 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 HARBI1Q96MB7 349 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 SPAG5Q96R06 1193 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 MSTO1Q9BUK6 570 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 TUBB2BQ9BVA1 445 aa4.1□□□□□ -1.75
LSM6P2-201ENST00000552208 NUP85Q9BW27 656 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms