RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 FRMD4BQ9Y2L6 1034 aa13.4□□□□□ -0.26
SNRPF-203ENST00000551316 PCYT1BQ9Y5K3 369 aaPredicted RBP13.4□□□□□ -0.26
SNRPF-203ENST00000551316 CUBNO60494 3623 aa13.4□□□□□ -0.26
SNRPF-203ENST00000551316 IGLV3-10A0A075B6K4 115 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 ILVBLA1L0T0 632 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 PDXKO00764 312 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 TEX33O43247 280 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 C8BP07358 591 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
SNRPF-203ENST00000551316 ADCY8P40145 1251 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 GNA12Q03113 381 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 TLE4Q04727 773 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 LTBQ06643 244 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 DCAF10Q5QP82 559 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
SNRPF-203ENST00000551316 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 GRHL3Q8TE85 626 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 EXOC2Q96KP1 924 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 SMR3AQ99954 134 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
SNRPF-203ENST00000551316 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 SSU72P8A0A1W2PR75 194 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 MAPK13O15264 365 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 ZW10O43264 779 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 PLEKP08567 350 aaPredicted RBP13.38□□□□□ -0.27
SNRPF-203ENST00000551316 ANKRD34CP0C6C1 535 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 SLC2A3P11169 496 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 KLK2P20151 261 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 CAPN3P20807 821 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 NR2F2P24468 414 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 NOP2P46087 812 aaKnown RBP13.38□□□□□ -0.27
SNRPF-203ENST00000551316 RAPGEF1Q13905 1077 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 HGSNATQ68CP4 663 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 LCN10Q6JVE6 187 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 CXXC5Q7LFL8 322 aaKnown RBP13.38□□□□□ -0.27
SNRPF-203ENST00000551316 MRGPRGQ86SM5 289 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 HPS6Q86YV9 775 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 TGIF2LYQ8IUE0 185 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 SFRP1Q8N474 314 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 TKTL2Q9H0I9 626 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 FGF21Q9NSA1 209 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 TRNAU1APQ9NX07 287 aaKnown RBP13.38□□□□□ -0.27
SNRPF-203ENST00000551316 RPH3AQ9Y2J0 694 aaPredicted RBP13.38□□□□□ -0.27
SNRPF-203ENST00000551316 ABCA4P78363 2273 aa13.38□□□□□ -0.27
SNRPF-203ENST00000551316 SPTBP11277 2137 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 TSPAN11A1L157 253 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 SART1O43290 800 aaKnown RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 KIF1CO43896 1103 aaKnown RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 TMCC1O94876 653 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 POP4O95707 220 aaKnown RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 HOXC4P09017 264 aaPredicted RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 PAEPP09466 180 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 FGF5P12034 268 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 MYCLP1P12525 358 aaPredicted RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 LPOP22079 712 aaPredicted RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 KELP23276 732 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 GTF2H1P32780 548 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 KCNK10P57789 538 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 SNRPD1P62314 119 aaKnown RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 CDK17Q00537 523 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 Q0VFX4 171 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 FOXD4Q12950 439 aaPredicted RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 ADAM9Q13443 819 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 ATP1A4Q13733 1029 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
SNRPF-203ENST00000551316 VWA2Q5GFL6 755 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 VWA5B1Q5TIE3 1220 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 PWWP2BQ6NUJ5 590 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 Q6ZS92 163 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 PARP9Q8IXQ6 854 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 RELTQ969Z4 430 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 CHST11Q9NPF2 352 aa13.37□□□□□ -0.27
SNRPF-203ENST00000551316 GRID2O43424 1007 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 CCNYL3P0C7X3 344 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 EDN3P14138 238 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 HHEXQ03014 270 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 SLC20A2Q08357 652 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 ELP6Q0PNE2 266 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 KYNUQ16719 465 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 UGP2Q16851 508 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 TMCO4Q5TGY1 634 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 ZBTB2Q8N680 514 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 C14orf79Q96F83 325 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 C9orf72Q96LT7 481 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 KLC2Q9H0B6 622 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 MCCC2Q9HCC0 563 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 TRAF3IP3Q9Y228 551 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 PCDHB4Q9Y5E5 795 aa13.36□□□□□ -0.27
SNRPF-203ENST00000551316 A0A1B0GUH1 482 aa13.35□□□□□ -0.27
SNRPF-203ENST00000551316 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
SNRPF-203ENST00000551316 C9P02748 559 aa13.35□□□□□ -0.27
SNRPF-203ENST00000551316 KRT13P13646 458 aa13.35□□□□□ -0.27
SNRPF-203ENST00000551316 MCCD1P59942 119 aaPredicted RBP13.35□□□□□ -0.27
SNRPF-203ENST00000551316 ZNF235Q14590 738 aa13.35□□□□□ -0.27
SNRPF-203ENST00000551316 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
SNRPF-203ENST00000551316 PNCKQ6P2M8 343 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms