RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RABGAP1LQ5R372 815 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ERMARDQ5T6L9 678 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 TANGO2Q6ICL3 276 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 LRRC31Q6UY01 552 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 CYP4V2Q6ZWL3 525 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-213ENST00000550629 PEX26Q7Z412 305 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 KIAA0907Q7Z7F0 614 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-213ENST00000550629 NT5DC3Q86UY8 548 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ZSCAN30Q86W11 494 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 FAM131BQ86XD5 332 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 DENND1CQ8IV53 801 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 MAP7D3Q8IWC1 876 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 YAF2Q8IY57 180 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 KATNAL2Q8IYT4 538 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 UBL4BQ8N7F7 174 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF557Q8N988 423 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-213ENST00000550629 FAM71BQ8TC56 605 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 OSCP1Q8WVF1 389 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ATP2A3Q93084 1043 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 RSPRY1Q96DX4 576 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 HES6Q96HZ4 224 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ASB2Q96Q27 587 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 PRMT1Q99873 361 aaKnown RBP5.89□□□□□ -1.47
SCAF11-213ENST00000550629 TRMT61BQ9BVS5 477 aaKnown RBP5.89□□□□□ -1.47
SCAF11-213ENST00000550629 TKTL2Q9H0I9 626 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ZMAT4Q9H898 229 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 MSL2Q9HCI7 577 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 GKN1Q9NS71 199 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 DONSONQ9NYP3 566 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 AMFRQ9UKV5 643 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 FZD10Q9ULW2 581 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 TFR2Q9UP52 801 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 JRKLQ9Y4A0 524 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 PCDHA3Q9Y5H8 950 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 OBSL1O75147 1896 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF638Q14966 1978 aaKnown RBP5.89□□□□□ -1.47
SCAF11-213ENST00000550629 C2orf16Q68DN1 1984 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 NOTCH4Q99466 2003 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 EYSQ5T1H1 3165 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 NUP210Q8TEM1 1887 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 MYH10P35580 1976 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 IGLV3-10A0A075B6K4 115 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SYNJ2BP-COX16A0A087WUM0 186 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 A0A0U1RQJ8 604 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 TYW5A2RUC4 315 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 DRGXA6NNA5 263 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 USP27XA6NNY8 438 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 TMEM110-MUSTN1A8MSY1 372 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 HEPACAM2A8MVW5 462 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 F5H5T6 163 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 I6L893 689 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 KIF2AO00139 706 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 HOXC11O43248 304 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 H2AFYO75367 372 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 NFATC1O95644 943 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PENKP01210 267 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 HMBSP08397 361 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 IRF1P10914 325 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 GLULP15104 373 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 IL1R2P27930 398 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 HOXC13P31276 330 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PTPN7P35236 360 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 CETN2P41208 172 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SSR1P43307 286 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 IFNAR2P48551 515 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PEX5P50542 639 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 RWDD2BP57060 319 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 TAS2R40P59535 323 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SEMA3BQ13214 749 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 TDGQ13569 410 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PRKD1Q15139 912 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SEPT7Q16181 437 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 TAZQ16635 292 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 MPPE1Q53F39 396 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 FAM133BQ5BKY9 247 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 MS4A13Q5J8X5 152 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 MANEALQ5VSG8 457 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 NADSYN1Q6IA69 706 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SCYL2Q6P3W7 929 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 C1orf228Q6PIY5 440 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PARM1Q6UWI2 310 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 VITQ6UXI7 678 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 KANSL1Q7Z3B3 1105 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PHYKPLQ8IUZ5 450 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 BBS7Q8IWZ6 715 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF683Q8IZ20 524 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 RCOR2Q8IZ40 523 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SLC44A3Q8N4M1 653 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 CPA6Q8N4T0 437 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 CCDC185Q8N715 623 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 KCTD6Q8NC69 237 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 HJURPQ8NCD3 748 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 EXD1Q8NHP7 514 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 ATRIPQ8WXE1 791 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 EDAQ92838 391 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 DNASE1L2Q92874 299 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 FGF14Q92915 247 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 NKD2Q969F2 451 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 GFM2Q969S9 779 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 MSANTD3Q96H12 275 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms