RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HK3P52790 923 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 INPP5AQ14642 412 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 ELOCQ15369 112 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 ODF2Q5BJF6 829 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 SLC9A4Q6AI14 798 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 BRAT1Q6PJG6 821 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 SRLQ86TD4 932 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 FSTL5Q8N475 847 aaPredicted RBP13.46□□□□□ -0.25
NUP188-211ENST00000550219 ARL10Q8N8L6 244 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 COG1Q8WTW3 980 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 SLC39A7Q92504 469 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 CCDC74AQ96AQ1 378 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 TBATAQ96M53 351 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 ZNF641Q96N77 438 aaPredicted RBP13.46□□□□□ -0.25
NUP188-211ENST00000550219 TUBGCP5Q96RT8 1024 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 HERPUD2Q9BSE4 406 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 APOOQ9BUR5 198 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 OSBPL8Q9BZF1 889 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 CPNE5Q9HCH3 593 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 PADI4Q9UM07 663 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.25
NUP188-211ENST00000550219 ATRXP46100 2492 aa13.46□□□□□ -0.26
NUP188-211ENST00000550219 ANKRD36A6QL64 1941 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 A0A1W2PNU3 283 aaPredicted RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 A8MX80 341 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ATXN7O15265 892 aaPredicted RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 DXOO77932 396 aaKnown RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 ALPIP09923 528 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ELFN1P0C7U0 828 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 KRT10P13645 584 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ZFXP17010 805 aaPredicted RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 CXCR5P32302 372 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 TMPRSS3P57727 454 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ERVPABLB-1P60509 514 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 SRP54P61011 504 aaKnown RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 BCL2L1Q07817 233 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ADCY2Q08462 1091 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 RALGDSQ12967 914 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 KLF1Q13351 362 aaPredicted RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 MTM1Q13496 603 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 TFDP2Q14188 446 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 PAFAH1B3Q15102 231 aaKnown RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 SEL1L2Q5TEA6 688 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 AFMIDQ63HM1 303 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 KCTD16Q68DU8 428 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 BBS12Q6ZW61 710 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 GKN2Q86XP6 184 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 SLC13A5Q86YT5 568 aaPredicted RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 CCDC50Q8IVM0 306 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ATL2Q8NHH9 583 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 SCG3Q8WXD2 468 aaKnown RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 HIC2Q96JB3 615 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 WDR92Q96MX6 357 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 SUDS3Q9H7L9 328 aaPredicted RBP13.45□□□□□ -0.26
NUP188-211ENST00000550219 EPB41L5Q9HCM4 733 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 ETNK2Q9NVF9 386 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 MOSPD1Q9UJG1 213 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 GPR34Q9UPC5 381 aa13.45□□□□□ -0.26
NUP188-211ENST00000550219 BAHCC1Q9P281 2608 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 LOC400499M0QZD8 3231 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 TEX51A0A1B0GUA7 166 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 TTC24A2A3L6 582 aaPredicted RBP13.44□□□□□ -0.26
NUP188-211ENST00000550219 AGRPO00253 132 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 CACNB4O00305 520 aaPredicted RBP13.44□□□□□ -0.26
NUP188-211ENST00000550219 CEP104O60308 925 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 TCEA3O75764 348 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 RECQL5O94762 991 aaPredicted RBP13.44□□□□□ -0.26
NUP188-211ENST00000550219 SCNN1BP51168 640 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 PDX1P52945 283 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 ZNF235Q14590 738 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 ARHGAP40Q5TG30 622 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 NCBP2-AS2Q69YL0 99 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 CREG2Q8IUH2 290 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 TP53INP2Q8IXH6 220 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 SDR16C5Q8N3Y7 309 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 PLD5Q8N7P1 536 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 KIF18AQ8NI77 898 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 ACTRT1Q8TDG2 376 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 HCAR2Q8TDS4 363 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 PDCD6IPQ8WUM4 868 aaKnown RBP13.44□□□□□ -0.26
NUP188-211ENST00000550219 HEMGNQ9BXL5 484 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 MAK16Q9BXY0 300 aaKnown RBP13.44□□□□□ -0.26
NUP188-211ENST00000550219 RABGEF1Q9UJ41 708 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 LRP4O75096 1905 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 LRRK1Q38SD2 2015 aa13.44□□□□□ -0.26
NUP188-211ENST00000550219 B4DGG1 531 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 APOL1O14791 398 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 ZNF185O15231 689 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 CST8O60676 142 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 C1QL1O75973 258 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 TJP3O95049 919 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 TNFSF15O95150 251 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 TNFP01375 233 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 RPLP0P05388 317 aaKnown RBP13.43□□□□□ -0.26
NUP188-211ENST00000550219 IL10RBQ08334 325 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 C19orf57Q0VDD7 668 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms