RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 CDK3Q00526 305 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 LRRC66Q68CR7 880 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 DOK6Q6PKX4 331 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 CCNYQ8ND76 341 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 PTCD2Q8WV60 388 aaKnown RBP19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 RAPGEF5Q92565 580 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 MAML1Q92585 1016 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 GRAMD1AQ96CP6 724 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 CHP1Q99653 195 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 TEX101Q9BY14 249 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 FOXP3Q9BZS1 431 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 EPB41L5Q9HCM4 733 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 SPTLC3Q9NUV7 552 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 KCTD5Q9NXV2 234 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 CHKBQ9Y259 395 aa19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 SMG1Q96Q15 3661 aaKnown RBP19.53■□□□□ 0.72
SLC48A1-207ENST00000549243 SCN8AQ9UQD0 1980 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 SSU72P8A0A1W2PR75 194 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 D6RAR5 112 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 PSMD11O00231 422 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 FZD6O60353 706 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 FUCA1P04066 466 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 HLA-DQB2P05538 268 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 CEACAM5P06731 702 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 KRT10P13645 584 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 CCNB1P14635 433 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 KDELR1P24390 212 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 GNPDA1P46926 289 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 POLD2P49005 469 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 CXADRP78310 365 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 SLC10A2Q12908 348 aaPredicted RBP19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 TSR1Q2NL82 804 aaKnown RBP19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 C14orf28Q4W4Y0 310 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 FAM182AQ5T1J6 154 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 CCNJLQ8IV13 435 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 VSTM4Q8IW00 320 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 NDUFAF2Q8N183 169 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 RNF214Q8ND24 703 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 WDR36Q8NI36 951 aaKnown RBP19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 SLC35G2Q8TBE7 412 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 KCNE4Q8WWG9 221 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 FAF2Q96CS3 445 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 PRR11Q96HE9 360 aaPredicted RBP19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 SLC46A1Q96NT5 459 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 TSGA13Q96PP4 275 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 LRRN3Q9H3W5 708 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 TSPY26PQ9H489 355 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 ABHD10Q9NUJ1 306 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 PPIL1Q9Y3C6 166 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 RNF215Q9Y6U7 377 aa19.52■□□□□ 0.72
SLC48A1-207ENST00000549243 CCDC187A0A096LP49 1063 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 A0A0J9YYE9 177 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 LRRD1A4D1F6 860 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 AGRPO00253 132 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 TNFSF15O95150 251 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 TRBC1P01850 177 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 TPM1P09493 284 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 MX2P20592 715 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 MAN1A1P33908 653 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 GPR1P46091 355 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 NIPAL4Q0D2K0 466 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 CERCAMQ5T4B2 595 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 OGFOD3Q6PK18 319 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 TECPR1Q7Z6L1 1165 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 OR6C4Q8NGE1 309 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 ARRDC2Q8TBH0 407 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 SCAMP4Q969E2 229 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 AP2M1Q96CW1 435 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 TDRD1Q9BXT4 1180 aaKnown RBP19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 FRMD8Q9BZ67 464 aaPredicted RBP19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 ABCG8Q9H221 673 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 SPATS2LQ9NUQ6 558 aaKnown RBP19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 DTLQ9NZJ0 730 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 LRIT1Q9P2V4 623 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 LCMT1Q9UIC8 334 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 ATXN7L1Q9ULK2 861 aaPredicted RBP19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 SUFUQ9UMX1 484 aa19.51■□□□□ 0.71
SLC48A1-207ENST00000549243 MGAQ8IWI9 3026 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 KCNK1O00180 336 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 KLK10O43240 276 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 MFAP3LO75121 409 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 GLB1P16278 677 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 AK4P27144 223 aaPredicted RBP19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 PTSQ03393 145 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 ILF3Q12906 894 aaKnown RBP eCLIP19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 HLTFQ14527 1009 aaKnown RBP eCLIP19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 ALG1LQ6GMV1 187 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 TRIM74Q86UV6 250 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 NRROSQ86YC3 692 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 CCDC13Q8IYE1 715 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 ARL14Q8N4G2 192 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 LPCAT1Q8NF37 534 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 GPBAR1Q8TDU6 330 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 CCDC42Q96M95 316 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 RNF157Q96PX1 679 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 GSDMCQ9BYG8 508 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 NHEJ1Q9H9Q4 299 aaPredicted RBP19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 TMEM98Q9Y2Y6 226 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 PCDHGA8Q9Y5G5 932 aa19.5■□□□□ 0.71
SLC48A1-207ENST00000549243 HEY1Q9Y5J3 304 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms