RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 HEATR9A2RTY3 570 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SLCO1B7G3V0H7 640 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 APBB3O95704 486 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 AGR2O95994 175 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 TFRCP02786 760 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ARAFP10398 606 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SRFP11831 508 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SLC6A12P48065 614 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 TFAMQ00059 246 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 CDH17Q12864 832 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 VEPH1Q14D04 833 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 DHCR24Q15392 516 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 XKR7Q5GH72 579 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ZC3H12BQ5HYM0 836 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 CCDC137Q6PK04 289 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SYT13Q7L8C5 426 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF567Q8N184 647 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PELI3Q8N2H9 469 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 KREMEN2Q8NCW0 462 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PPHLN1Q8NEY8 458 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 GOT1L1Q8NHS2 421 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 BADQ92934 168 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ASIC4Q96FT7 647 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PAAF1Q9BRP4 392 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 POLR2J2Q9GZM3 115 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 POLR2J3Q9H1A7 115 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 RHBGQ9H310 441 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 MUC13Q9H3R2 512 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SUGCTQ9HAC7 445 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ZFATQ9P243 1243 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ACOT9Q9Y305 439 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 F8VP50 259 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 H0YJX3 145 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 LEFTY2O00292 366 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 TPP1O14773 563 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PSIP1O75475 530 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ACRP10323 421 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 CCNB1P14635 433 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PDGFRAP16234 1089 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 DDX5P17844 614 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF844Q08AG5 666 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 MINDY4Q4G0A6 757 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 TEDDM1Q5T9Z0 273 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 SYPL2Q5VXT5 272 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 GET4Q7L5D6 327 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ACOT1Q86TX2 421 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 SRRM1Q8IYB3 904 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PLD6Q8N2A8 252 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 KLHL23Q8NBE8 558 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ANKK1Q8NFD2 765 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 OR13J1Q8NGT2 312 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PPP2R3CQ969Q6 453 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 LRGUKQ96M69 825 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ZFP42Q96MM3 310 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 CDC6Q99741 560 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 P2RY13Q9BPV8 354 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 FEM1AQ9BSK4 669 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PARD6BQ9BYG5 372 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 SLC29A3Q9BZD2 475 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 DUSP15Q9H1R2 295 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 NINJ2Q9NZG7 142 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 IL17CQ9P0M4 197 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 KRBA1A5PL33 1030 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 GOLGA8IPA6NC78 632 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 GOLGA8JA6NMD2 632 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 MFSD11O43934 449 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 BRINP1O60477 761 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 DNAJA2O60884 412 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 CBFA2T3O75081 653 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 CDH16O75309 829 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 TSPAN12O95859 305 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ENO3P13929 434 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 EDN3P14138 238 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 GOT1P17174 413 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 SULT1E1P49888 294 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 AFF1P51825 1210 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ATP6V0D1P61421 351 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 SARNPP82979 210 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF569Q5MCW4 686 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 TSTD2Q5T7W7 516 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PRAMEF8Q5VWM4 474 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PRAMEF7Q5VXH5 474 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 FBXL22Q6P050 247 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 DSTYKQ6XUX3 929 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 L3MBTL4Q8NA19 623 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 TP53I13Q8NBR0 393 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 CDK15Q96Q40 435 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PHF7Q9BWX1 381 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ADGRE3Q9BY15 652 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 SYTL2Q9HCH5 934 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 C8orf4Q9NR00 106 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 GMIPQ9P107 970 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 WASF2Q9Y6W5 498 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 FAM86C2PA6NEL3 165 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ADH1CP00326 375 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 APOEP02649 317 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 RPS17P08708 135 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 CSF2RAP15509 400 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 PRLHRP49683 370 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms