RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 MAP3K6O95382 1288 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 JCHAINP01591 159 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 GOLGA6DP0CG33 693 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 GLB1P16278 677 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 CTPS1P17812 591 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 LHCGRP22888 699 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 MLLT3P42568 568 aaPredicted RBP11.37□□□□□ -0.59
BEST3-209ENST00000548658 MAGEA1P43355 309 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 ABCG1P45844 678 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 GPR1P46091 355 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 NR2C2P49116 596 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 IFI35P80217 286 aaPredicted RBP11.37□□□□□ -0.59
BEST3-209ENST00000548658 CDK3Q00526 305 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 DSC2Q02487 901 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 ILF3Q12906 894 aaKnown RBP eCLIP11.37□□□□□ -0.59
BEST3-209ENST00000548658 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
BEST3-209ENST00000548658 TFDP2Q14188 446 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 SPA17Q15506 151 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 TBC1D25Q3MII6 688 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 LRRC66Q68CR7 880 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 SLC9A4Q6AI14 798 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 RAET1GQ6H3X3 334 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 C19orf48Q6RUI8 117 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 IGF2-ASQ6U949 168 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 CRTC1Q6UUV9 634 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 ZNF765Q7L2R6 523 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 TECPR1Q7Z6L1 1165 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 CCDC170Q8IYT3 715 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 NRSN1Q8IZ57 195 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 PLD5Q8N7P1 536 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 ARRDC2Q8TBH0 407 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 KIAA1524Q8TCG1 905 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 CCHCR1Q8TD31 782 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 AP2M1Q96CW1 435 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 LYSMD1Q96S90 227 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 LGR4Q9BXB1 951 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 GSDMCQ9BYG8 508 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 TMEM168Q9H0V1 697 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 DPEP2Q9H4A9 486 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 PCDH9Q9HC56 1237 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 GOLGA6AQ9NYA3 693 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 SIRPGQ9P1W8 387 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
BEST3-209ENST00000548658 PCDHB1Q9Y5F3 818 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 HEY1Q9Y5J3 304 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 ASXL3Q9C0F0 2248 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 PKD1L2Q7Z442 2459 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 RGSL1A5PLK6 1076 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 CAPN8A6NHC0 703 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 ANKRD66B4E2M5 251 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 NUDT21O43809 227 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 MPOP05164 745 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 HLA-DQB2P05538 268 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 CEACAM5P06731 702 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 CELA2BP08218 269 aaPredicted RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 RBMS1P29558 406 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 NOP2P46087 812 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 HADHBP55084 474 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 GABREP78334 506 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 PTSQ03393 145 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 AP1B1Q10567 949 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 EIF3IQ13347 325 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 COL28A1Q2UY09 1125 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 PERM1Q5SV97 790 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 ADAMTSL4Q6UY14 1074 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 TSPAN33Q86UF1 283 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 ARL14Q8N4G2 192 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
BEST3-209ENST00000548658 KYQ8NBH2 561 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 ZNF248Q8NDW4 579 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 GPR156Q8NFN8 814 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 EXD1Q8NHP7 514 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 WDR36Q8NI36 951 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 GPBAR1Q8TDU6 330 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 GFM1Q96RP9 751 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 SRPK1Q96SB4 655 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 LGMNQ99538 433 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 MLPHQ9BV36 600 aaPredicted RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 CARS2Q9HA77 564 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 MRPL40Q9NQ50 206 aaKnown RBP11.36□□□□□ -0.59
BEST3-209ENST00000548658 THSD1Q9NS62 852 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 APPL1Q9UKG1 709 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 CHKBQ9Y259 395 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 SLC17A4Q9Y2C5 497 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 PCDHGA8Q9Y5G5 932 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 ADAMTS20P59510 1910 aa11.36□□□□□ -0.59
BEST3-209ENST00000548658 C3orf70A6NLC5 250 aaPredicted RBP11.35□□□□□ -0.59
BEST3-209ENST00000548658 KCNK1O00180 336 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 NTN3O00634 580 aaPredicted RBP11.35□□□□□ -0.59
BEST3-209ENST00000548658 PSTPIP1O43586 416 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 IPO7O95373 1038 aaKnown RBP11.35□□□□□ -0.59
BEST3-209ENST00000548658 LCA5LO95447 670 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 PRLP01236 227 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 KRT1P04264 644 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 IVLP07476 585 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 COMTP21964 271 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 CYLC1P35663 651 aaPredicted RBP11.35□□□□□ -0.59
BEST3-209ENST00000548658 PCBP4P57723 403 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms