RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 TP53I13Q8NBR0 393 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-213ENST00000546820 OR52K1Q8NGK4 314 aa13.75□□□□□ -0.21
PTCH1-213ENST00000546820 AP2M1Q96CW1 435 aa13.75□□□□□ -0.21
PTCH1-213ENST00000546820 MYOCQ99972 504 aa13.75□□□□□ -0.21
PTCH1-213ENST00000546820 FAM83DQ9H4H8 585 aa13.75□□□□□ -0.21
PTCH1-213ENST00000546820 ANKRD6Q9Y2G4 727 aa13.75□□□□□ -0.21
PTCH1-213ENST00000546820 SPO11Q9Y5K1 396 aa13.75□□□□□ -0.21
PTCH1-213ENST00000546820 A0A0U1RQS6 177 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 A0A1B0GVT2 93 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 A0A1W2PR77 199 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 FAM187AA6NFU0 413 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 RAD51BO15315 384 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 STX7O15400 261 aaKnown RBP13.74□□□□□ -0.21
PTCH1-213ENST00000546820 DFNA5O60443 496 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 PCCBP05166 539 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 C1SP09871 688 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 TSHRP16473 764 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 DEKP35659 375 aaKnown RBP13.74□□□□□ -0.21
PTCH1-213ENST00000546820 NPY2RP49146 381 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 ATXN3P54252 364 aaPredicted RBP13.74□□□□□ -0.21
PTCH1-213ENST00000546820 CLDN2P57739 230 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 IRX4P78413 519 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 MTM1Q13496 603 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 OLIG2Q13516 323 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 INPP5AQ14642 412 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 IRF4Q15306 451 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 CCDC6Q16204 474 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
PTCH1-213ENST00000546820 KYAT3Q6YP21 454 aaKnown RBP13.74□□□□□ -0.21
PTCH1-213ENST00000546820 GCNT7Q6ZNI0 430 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 PTAR1Q7Z6K3 402 aaPredicted RBP13.74□□□□□ -0.21
PTCH1-213ENST00000546820 ABI3BPQ7Z7G0 1075 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 JAMLQ86YT9 394 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 PPIL6Q8IXY8 311 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 CEP112Q8N8E3 955 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 BMFQ96LC9 184 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 C19orf43Q9BQ61 176 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 ABCG8Q9H221 673 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 CASS4Q9NQ75 786 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 MBNL1Q9NR56 388 aaKnown RBP13.74□□□□□ -0.21
PTCH1-213ENST00000546820 BFARQ9NZS9 450 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 MRFAP1Q9Y605 127 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 RALGAPA1Q6GYQ0 2036 aa13.74□□□□□ -0.21
PTCH1-213ENST00000546820 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 POM121BA6NF01 834 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 ESPNB1AK53 854 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 PATE3B3GLJ2 98 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 SMAPO00193 183 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 CACNB4O00305 520 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-213ENST00000546820 TTI1O43156 1089 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 ZNF500O60304 480 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-213ENST00000546820 SLC4A1P02730 911 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 HOXC4P09017 264 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-213ENST00000546820 CTAGE8P0CG41 777 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 THEGLP0DJG4 465 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 TPH1P17752 444 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 HTR1BP28222 390 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 TEAD1P28347 426 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 HADHAP40939 763 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 MAGEA6P43360 314 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 GPR1P46091 355 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 THOP1P52888 689 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 TERF1P54274 439 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 PFN3P60673 137 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 SKIDA1Q1XH10 827 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 ESRP1Q6NXG1 681 aaKnown RBP13.73□□□□□ -0.21
PTCH1-213ENST00000546820 LRRC8BQ6P9F7 803 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 NLRP9Q7RTR0 991 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 CTAGE6Q86UF2 777 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 CTAGE4Q8IX94 777 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 TTC30BQ8N4P2 665 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 DCLK2Q8N568 766 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 OXR1Q8N573 874 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 BBOF1Q8ND07 529 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 MCUQ8NE86 351 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 PLEKHG4BQ96PX9 1271 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 APOOQ9BUR5 198 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 GDF3Q9NR23 364 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 IL17CQ9P0M4 197 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 CD84Q9UIB8 345 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 SLCO1B1Q9Y6L6 691 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 TNRC6BQ9UPQ9 1833 aaKnown RBP13.73□□□□□ -0.21
PTCH1-213ENST00000546820 DOCK9Q9BZ29 2069 aa13.73□□□□□ -0.21
PTCH1-213ENST00000546820 HEATR9A2RTY3 570 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 EFCAB8A8MWE9 144 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 H0Y8X5 98 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 DNALI1O14645 258 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-213ENST00000546820 AURKAO14965 403 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 WNT1P04628 370 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 MLNP12872 115 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 ENGP17813 658 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 GM2AP17900 193 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 KELP23276 732 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 ADRA1DP25100 572 aa13.72□□□□□ -0.21
PTCH1-213ENST00000546820 IGFALSP35858 605 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms