RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 AP2M1Q96CW1 435 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 LIN37Q96GY3 246 aaPredicted RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 FCRL3Q96P31 734 aaPredicted RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 LGR4Q9BXB1 951 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 MAK16Q9BXY0 300 aaKnown RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 DPH1Q9BZG8 443 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TMEM168Q9H0V1 697 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 LRRN3Q9H3W5 708 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TSPY26PQ9H489 355 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 PRORYQ9H606 182 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 ASCL3Q9NQ33 180 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 MRPL40Q9NQ50 206 aaKnown RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 GOLGA6AQ9NYA3 693 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 LRIT1Q9P2V4 623 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 APPL1Q9UKG1 709 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TTLL3Q9Y4R7 772 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 CHD5Q8TDI0 1954 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 A0A0J9YYE9 177 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 A0A1W2PQM1 296 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 LRRD1A4D1F6 860 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 D6RAR5 112 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 TK2O00142 265 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 PLD2O14939 933 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 KLK10O43240 276 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 FZD6O60353 706 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 NOBOXO60393 691 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 TNFSF15O95150 251 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 TRBC1P01850 177 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 CEACAM5P06731 702 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 IVLP07476 585 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 PDHA1P08559 390 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 HOXB3P14651 431 aaPredicted RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 ZFXP17010 805 aaPredicted RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 SLC1A1P43005 524 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 INHBCP55103 352 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 TAS2R40P59535 323 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 DSC2Q02487 901 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 MESDQ14696 234 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 CLPPQ16740 277 aaPredicted RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 LRRC38Q5VT99 294 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 LRRC66Q68CR7 880 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 KCTD16Q68DU8 428 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 RAB11FIP2Q7L804 512 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 TSPAN33Q86UF1 283 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 CNGA4Q8IV77 575 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 FBXO39Q8N4B4 442 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 PQLC3Q8N755 202 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 Q8N9G6 341 aaPredicted RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 SLC35G2Q8TBE7 412 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 ARRDC2Q8TBH0 407 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 CCHCR1Q8TD31 782 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 RAPGEF5Q92565 580 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 HDAC11Q96DB2 347 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 NAF1Q96HR8 494 aaKnown RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 RNF157Q96PX1 679 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 TDRD1Q9BXT4 1180 aaKnown RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 PACSIN1Q9BY11 444 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 ADGRE3Q9BY15 652 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 FRMD8Q9BZ67 464 aaPredicted RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 BRD8Q9H0E9 1235 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 ABCG8Q9H221 673 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 EPB41L5Q9HCM4 733 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 AKAP7Q9P0M2 348 aaPredicted RBP9.34□□□□□ -0.91
YBX3-218ENST00000546298 CHKBQ9Y259 395 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 SLC17A4Q9Y2C5 497 aa9.34□□□□□ -0.91
YBX3-218ENST00000546298 PTPRBP23467 1997 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 RGSL1A5PLK6 1076 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 CAPN8A6NHC0 703 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 RHPN2P1A8MT19 583 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 B4DGG1 531 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 APOL1O14791 398 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 MTA2O94776 668 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 MAP3K6O95382 1288 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 JCHAINP01591 159 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 ITGA2BP08514 1039 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 JMJD7P0C870 316 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 CCKBRP32239 447 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 GNPDA1P46926 289 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 STC1P52823 247 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 TMPRSS3P57727 454 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 CXADRP78310 365 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 PTSQ03393 145 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 GBE1Q04446 702 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 PPIDQ08752 370 aaKnown RBP9.33□□□□□ -0.92
YBX3-218ENST00000546298 LRP8Q14114 963 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 HLTFQ14527 1009 aaKnown RBP eCLIP9.33□□□□□ -0.92
YBX3-218ENST00000546298 PDK1Q15118 436 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 ADAMTSL4Q6UY14 1074 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 NYAP1Q6ZVC0 841 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 BZW1Q7L1Q6 419 aaKnown RBP9.33□□□□□ -0.92
YBX3-218ENST00000546298 CLEC14AQ86T13 490 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 PELI3Q8N2H9 469 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.33□□□□□ -0.92
YBX3-218ENST00000546298 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 EXD1Q8NHP7 514 aa9.33□□□□□ -0.92
YBX3-218ENST00000546298 CCL4L1Q8NHW4 92 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms