RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 OR13H1Q8NG92 308 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 SLCO2A1Q92959 643 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 KLHDC7BQ96G42 594 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 GPR27Q9NS67 375 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 HACD3Q9P035 362 aa20.46■□□□□ 0.87
HMGA2-211ENST00000545998 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.46■□□□□ 0.87
HMGA2-211ENST00000545998 CEP250Q9BV73 2442 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.45■□□□□ 0.86
HMGA2-211ENST00000545998 E7EVH7 732 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 CCDC188H7C350 402 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 ECEL1O95672 775 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 PCCBP05166 539 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 APRTP07741 180 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 SYPP08247 313 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 THEGLP0DJG4 465 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 CTSKP43235 329 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 RABIFP47224 123 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 SPINT3P49223 89 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 C21orf59P57076 290 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 NXPH1P58417 271 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 PFN3P60673 137 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 ESRP1Q6NXG1 681 aaKnown RBP20.45■□□□□ 0.86
HMGA2-211ENST00000545998 Q6ZSR6 202 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 PTAR1Q7Z6K3 402 aaPredicted RBP20.45■□□□□ 0.86
HMGA2-211ENST00000545998 ALYREFQ86V81 257 aaKnown RBP20.45■□□□□ 0.86
HMGA2-211ENST00000545998 NRSN1Q8IZ57 195 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 PELI3Q8N2H9 469 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 TTC30BQ8N4P2 665 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 BLOC1S5Q8TDH9 187 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 GPR63Q9BZJ6 419 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 ZDHHC5Q9C0B5 715 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 EIF2B3Q9NR50 452 aaKnown RBP20.45■□□□□ 0.86
HMGA2-211ENST00000545998 RXFP3Q9NSD7 469 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 SNX11Q9Y5W9 270 aa20.45■□□□□ 0.86
HMGA2-211ENST00000545998 RGSL1A5PLK6 1076 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 MAGEC1O60732 1142 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 GAS8O95995 478 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 PTGIRP43119 386 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 LMAN1P49257 510 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 VPS41P49754 854 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 BASP1P80723 227 aaKnown RBP20.44■□□□□ 0.86
HMGA2-211ENST00000545998 DPTQ07507 201 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 GPS1Q13098 491 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 MTM1Q13496 603 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 INPP5AQ14642 412 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 ZNF765Q7L2R6 523 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 GLT6D1Q7Z4J2 308 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 LINC00523Q86TU6 105 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 SPATS2Q86XZ4 545 aaKnown RBP20.44■□□□□ 0.86
HMGA2-211ENST00000545998 KLHL7Q8IXQ5 586 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 SLC22A18ASQ8N1D0 253 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 ZNF592Q92610 1267 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 ABCG8Q9H221 673 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 PKD2L2Q9NZM6 624 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 CD84Q9UIB8 345 aa20.44■□□□□ 0.86
HMGA2-211ENST00000545998 K7ESM1 405 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 TOR1BO14657 336 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 SLC4A1P02730 911 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 HMGCLP35914 325 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 PNCKQ6P2M8 343 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 NLRP8Q86W28 1048 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 SPATA4Q8NEY3 305 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 RUNDC3BQ96NL0 473 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 CDC23Q9UJX2 597 aa20.43■□□□□ 0.86
HMGA2-211ENST00000545998 URI1O94763 535 aaPredicted RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 TRIM23P36406 574 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 YPEL5P62699 121 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 AASDHQ4L235 1098 aaPredicted RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 IL27RAQ6UWB1 636 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 ZNF572Q7Z3I7 529 aaPredicted RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 DCP2Q8IU60 420 aaKnown RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 KIAA2013Q8IYS2 634 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 OR52K1Q8NGK4 314 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 BRSK1Q8TDC3 778 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 SCAMP4Q969E2 229 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 AP2M1Q96CW1 435 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 TPSB2P20231 275 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 GRIA1P42261 906 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 MAGEA6P43360 314 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 PTK6Q13882 451 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 KCNJ11Q14654 390 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 PPP1R7Q15435 360 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 TAF1AQ15573 450 aaPredicted RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 TPSAB1Q15661 275 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 TPRG1LQ5T0D9 272 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 APOOQ9BUR5 198 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 EDEM2Q9BV94 578 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 GTPBP2Q9BX10 602 aaKnown RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 CASS4Q9NQ75 786 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 GDF3Q9NR23 364 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 PIH1D1Q9NWS0 290 aaKnown RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 IL17CQ9P0M4 197 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 NFKBIL1Q9UBC1 381 aaPredicted RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 OR1A2Q9Y585 309 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 ARL5AQ9Y689 179 aa20.42■□□□□ 0.86
HMGA2-211ENST00000545998 ASCC3Q8N3C0 2202 aaKnown RBP20.42■□□□□ 0.86
HMGA2-211ENST00000545998 ZNF106Q9H2Y7 1883 aaKnown RBP20.41■□□□□ 0.86
HMGA2-211ENST00000545998 TDRD6O60522 2096 aaKnown RBP20.41■□□□□ 0.86
HMGA2-211ENST00000545998 CDX4O14627 284 aaPredicted RBP20.41■□□□□ 0.86
HMGA2-211ENST00000545998 GDF9O60383 454 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms