RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TMPRSS7Q7RTY8 843 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 TECPR1Q7Z6L1 1165 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 RAVER1Q8IY67 606 aaKnown RBP15.71■□□□□ 0.11
CCDC78-216ENST00000544996 SDR16C5Q8N3Y7 309 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 FAM181AQ8N9Y4 354 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 OR56A4Q8NGH8 313 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 CCHCR1Q8TD31 782 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 ALG3Q92685 438 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 AP2M1Q96CW1 435 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 QKIQ96PU8 341 aaKnown RBP eCLIP15.71■□□□□ 0.11
CCDC78-216ENST00000544996 LYSMD1Q96S90 227 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 LRRC61Q9BV99 259 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 TRHDEQ9UKU6 1024 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 ADGRG1Q9Y653 693 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 DGKBQ9Y6T7 804 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 TP53BP1Q12888 1972 aaPredicted RBP15.71■□□□□ 0.1
CCDC78-216ENST00000544996 A0A0U1RQJ8 604 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 C1orf232A0A0U1RR37 186 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 TMEM202A6NGA9 273 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 GCATO75600 419 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 CLDN7O95471 211 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 FTCDO95954 541 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 PYGMP11217 842 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 TEAD1P28347 426 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 GPR1P46091 355 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 STC1P52823 247 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 E2F1Q01094 437 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 CDK18Q07002 472 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 WASHC5Q12768 1159 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 C1orf61Q13536 156 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 GALNT3Q14435 633 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 NOMO1Q15155 1222 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 SMAD1Q15797 465 aaKnown RBP15.7■□□□□ 0.1
CCDC78-216ENST00000544996 QPCTQ16769 361 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 DEFB133Q30KQ1 61 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 RAET1GQ6H3X3 334 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 LVRNQ6Q4G3 990 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 ZNF765Q7L2R6 523 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 KDELC2Q7Z4H8 507 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 NLRP8Q86W28 1048 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 HEATR4Q86WZ0 1026 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 NRSN1Q8IZ57 195 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 SPATA22Q8NHS9 363 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 ACTL9Q8TC94 416 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 UBE2Q2Q8WVN8 375 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 GLMNQ92990 594 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 SMIM14Q96QK8 99 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 LGR4Q9BXB1 951 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 TEX101Q9BY14 249 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 MOSPD1Q9UJG1 213 aa15.7■□□□□ 0.1
CCDC78-216ENST00000544996 PNMA8BQ9ULN7 279 aaPredicted RBP15.7■□□□□ 0.1
CCDC78-216ENST00000544996 ANKRD36A6QL64 1941 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 A0A0U1RQS6 177 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 GOLGA6L9A6NEM1 432 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 PMPCBO75439 489 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 ZNF189O75820 626 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-216ENST00000544996 STK10O94804 968 aaKnown RBP15.69■□□□□ 0.1
CCDC78-216ENST00000544996 RPIAP49247 311 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 CDK3Q00526 305 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 OTUD4Q01804 1114 aaKnown RBP15.69■□□□□ 0.1
CCDC78-216ENST00000544996 FAM182AQ5T1J6 154 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 UNQ6494/PRO21346Q6UXR6 183 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 CCNI2Q6ZMN8 369 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-216ENST00000544996 TMPRSS12Q86WS5 348 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 GKN2Q86XP6 184 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 CDKL3Q8IVW4 592 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-216ENST00000544996 OR1E3Q8WZA6 343 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 TADA1Q96BN2 335 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 TRIB3Q96RU7 358 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 SRPK1Q96SB4 655 aaKnown RBP15.69■□□□□ 0.1
CCDC78-216ENST00000544996 CLPBQ9H078 707 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 ABCG8Q9H221 673 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 FGF22Q9HCT0 170 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 PKD2L2Q9NZM6 624 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 FAM153AQ9UHL3 310 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 CD84Q9UIB8 345 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 GUCA1BQ9UMX6 200 aa15.69■□□□□ 0.1
CCDC78-216ENST00000544996 PACSIN2Q9UNF0 486 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-216ENST00000544996 RGSL1A5PLK6 1076 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 YY2O15391 372 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 NDST3O95803 873 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 MT-CYBP00156 380 aaPredicted RBP15.68■□□□□ 0.1
CCDC78-216ENST00000544996 CCDC175P0C221 793 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 JUPP14923 745 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 NFKB1P19838 968 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 CD68P34810 354 aaPredicted RBP15.68■□□□□ 0.1
CCDC78-216ENST00000544996 EIF3EP60228 445 aaKnown RBP15.68■□□□□ 0.1
CCDC78-216ENST00000544996 NR0B2Q15466 257 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 C6orf132Q5T0Z8 1188 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 DARS2Q6PI48 645 aaKnown RBP15.68■□□□□ 0.1
CCDC78-216ENST00000544996 ADAMTSL4Q6UY14 1074 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 LRRC8AQ8IWT6 810 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 ZNF567Q8N184 647 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 PELI3Q8N2H9 469 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 GATA6Q92908 595 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 SCAMP4Q969E2 229 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 PDXPQ96GD0 296 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 FCRL5Q96RD9 977 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 BOCQ9BWV1 1114 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms