RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PDHA1P08559 390 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 C1QTNF9P0C862 333 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 GIMD1P0DJR0 217 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 GM2AP17900 193 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 LHCGRP22888 699 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 CTNNA2P26232 953 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 PTPN7P35236 360 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 ETV3P41162 512 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 RWDD2BP57060 319 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 SEMG2Q02383 582 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 NIPAL4Q0D2K0 466 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 ZBTB17Q13105 803 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 XRCC4Q13426 336 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 PRKD1Q15139 912 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-216ENST00000544989 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 CCDC181Q5TID7 509 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 KAZNQ674X7 775 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 LRRC66Q68CR7 880 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 DENND2CQ68D51 928 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 RAET1GQ6H3X3 334 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 CRTC1Q6UUV9 634 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 RAD9BQ6WBX8 426 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 BBS12Q6ZW61 710 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 TECPR1Q7Z6L1 1165 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 RBFAQ8N0V3 343 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 UBL4BQ8N7F7 174 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 PLA2G15Q8NCC3 412 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 LPCAT1Q8NF37 534 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 FUBP1Q96AE4 644 aaKnown RBP11.8□□□□□ -0.52
HDAC4-216ENST00000544989 GRAMD1AQ96CP6 724 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 HAUS1Q96CS2 278 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 IMP4Q96G21 291 aaKnown RBP11.8□□□□□ -0.52
HDAC4-216ENST00000544989 RBM15Q96T37 977 aaKnown RBP eCLIP11.8□□□□□ -0.52
HDAC4-216ENST00000544989 MLPHQ9BV36 600 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-216ENST00000544989 TEX101Q9BY14 249 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 TSGA10Q9BZW7 698 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 ABCG4Q9H172 646 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 PKD2L2Q9NZM6 624 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 DKK4Q9UBT3 224 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 TRHDEQ9UKU6 1024 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 ZMIZ1Q9ULJ6 1067 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 CHKBQ9Y259 395 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 LRRK1Q38SD2 2015 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 MIF4GDA9UHW6 222 aaKnown RBP11.79□□□□□ -0.52
HDAC4-216ENST00000544989 APOC4-APOC2K7ER74 178 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 GCATO75600 419 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 PRLP01236 227 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 APOC2P02655 101 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 CTPS1P17812 591 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 GPR1P46091 355 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 STC1P52823 247 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 SKOR1P84550 965 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 PTSQ03393 145 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 CDK18Q07002 472 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 DEFB133Q30KQ1 61 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 HES3Q5TGS1 186 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 NPNTQ6UXI9 565 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 ADAMTSL4Q6UY14 1074 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 Q6ZVL8 140 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 HSD11B1LQ7Z5J1 315 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 HEATR4Q86WZ0 1026 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC4-216ENST00000544989 RNF10Q8N5U6 811 aaKnown RBP11.79□□□□□ -0.52
HDAC4-216ENST00000544989 CNTD1Q8N815 330 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 ARL10Q8N8L6 244 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 ACRBPQ8NEB7 543 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 ZCCHC14Q8WYQ9 949 aaKnown RBP11.79□□□□□ -0.52
HDAC4-216ENST00000544989 TSACCQ96A04 125 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-216ENST00000544989 AP2M1Q96CW1 435 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 TEKT5Q96M29 485 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 AGAP3Q96P47 875 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 PPP1R2P1Q96PQ5 205 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
HDAC4-216ENST00000544989 GLOD4Q9HC38 313 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 AMFRQ9UKV5 643 aa11.79□□□□□ -0.52
HDAC4-216ENST00000544989 NAV2Q8IVL1 2488 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 C1orf232A0A0U1RR37 186 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 PRSS38A1L453 326 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 EME2A4GXA9 379 aaPredicted RBP11.78□□□□□ -0.52
HDAC4-216ENST00000544989 GOLGA6CA6NDK9 693 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 GOLGA6BA6NDN3 693 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 YY2O15391 372 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 ZW10O43264 779 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 NRDCO43847 1150 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 STK10O94804 968 aaKnown RBP11.78□□□□□ -0.52
HDAC4-216ENST00000544989 TJP3O95049 919 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 MMP2P08253 660 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 GOLGA6DP0CG33 693 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 PTPN3P26045 913 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 CDK3Q00526 305 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 QPCTQ16769 361 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 PEX26Q7Z412 305 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 TSPAN33Q86UF1 283 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 TMEM139Q8IV31 216 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 LRRC57Q8N9N7 239 aa11.78□□□□□ -0.52
HDAC4-216ENST00000544989 SPC24Q8NBT2 197 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms