RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PRDX6P30041 224 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 CDC25CP30307 473 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PLK1P53350 603 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 AP1S1P61966 158 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PDCD2Q16342 344 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-209ENST00000543886 HTR3DQ70Z44 454 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 NECAB2Q7Z6G3 386 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 ISCA2Q86U28 154 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PHTF2Q8N3S3 785 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 KLHL23Q8NBE8 558 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 USP13Q92995 863 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PHF21BQ96EK2 531 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 ALG14Q96F25 216 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 DENND4CQ5VZ89 1909 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 A0A1W2PRU2 124 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 ZBTB14O43829 449 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 SMIM24O75264 130 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 CIB2O75838 187 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 SRP72O76094 671 aaKnown RBP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 HNRNPLP14866 589 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 CD1DP15813 335 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 EPHA3P29320 983 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 FMO4P31512 558 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 RAP1GDS1P52306 607 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 KPNB1Q14974 876 aaKnown RBP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 LSM12Q3MHD2 195 aaKnown RBP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 MPPE1Q53F39 396 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 SCUBE1Q8IWY4 988 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 BBS7Q8IWZ6 715 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 CPXM2Q8N436 756 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 RYBPQ8N488 228 aaPredicted RBP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 KDM1BQ8NB78 822 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 KREMEN2Q8NCW0 462 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 SH3RF2Q8TEC5 729 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 LPGAT1Q92604 370 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 FAR2Q96K12 515 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 THTPAQ9BU02 230 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 CCDC28BQ9BUN5 200 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 LRRC3Q9BY71 257 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 FKBPLQ9UIM3 349 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 MTF2Q9Y483 593 aaPredicted RBP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 PCDHB9Q9Y5E1 797 aa17.04■□□□□ 0.32
PTPRO-209ENST00000543886 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.04■□□□□ 0.32
PTPRO-209ENST00000543886 TM7SF2O76062 418 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 MC4RP32245 332 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 TIAL1Q01085 375 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPRO-209ENST00000543886 KLF10Q13118 480 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 NAA25Q14CX7 972 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 C6orf163Q5TEZ5 329 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 NXNQ6DKJ4 435 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 LILRA6Q6PI73 481 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 APCDD1Q8J025 514 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 EXT2Q93063 718 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 PTERQ96BW5 349 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 FAM136AQ96C01 138 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 MYO19Q96H55 970 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 CORO1BQ9BR76 489 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 OSBPL1AQ9BXW6 950 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 TM6SF2Q9BZW4 377 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 SYTL2Q9HCH5 934 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 ASAH2Q9NR71 780 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 TAS2R13Q9NYV9 303 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 FNDC3AQ9Y2H6 1198 aaKnown RBP17.03■□□□□ 0.32
PTPRO-209ENST00000543886 TMEM233B4DJY2 109 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 K7ERQ8 282 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 MT-CO1P00395 513 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 GJA1P17302 382 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 TTPAP49638 278 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 HTRA4P83105 476 aaPredicted RBP17.03■□□□□ 0.32
PTPRO-209ENST00000543886 MPP7Q5T2T1 576 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 TPGS1Q6ZTW0 290 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 FRMD7Q6ZUT3 714 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 ULK2Q8IYT8 1036 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 TTC30BQ8N4P2 665 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 ENDOVQ8N8Q3 282 aaKnown RBP17.03■□□□□ 0.32
PTPRO-209ENST00000543886 STMN2Q93045 179 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 ACDQ96AP0 544 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 EMILIN2Q9BXX0 1053 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 DCLRE1BQ9H816 532 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 BPIFA1Q9NP55 256 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 PLK2Q9NYY3 685 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 NKX1-2Q9UD57 310 aaPredicted RBP17.03■□□□□ 0.32
PTPRO-209ENST00000543886 PKP3Q9Y446 797 aa17.03■□□□□ 0.32
PTPRO-209ENST00000543886 CSPG5O95196 566 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 ANP32DO95626 131 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 PENKP01210 267 aaPredicted RBP17.02■□□□□ 0.32
PTPRO-209ENST00000543886 LINC00271P0C7V0 271 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 TPBGLP0DKB5 382 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 COX4I1P13073 169 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 IMPDH1P20839 514 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 CPOXP36551 454 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 NFKB2Q00653 900 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 ZRANB3Q5FWF4 1079 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 AARS2Q5JTZ9 985 aaKnown RBP17.02■□□□□ 0.32
PTPRO-209ENST00000543886 PAF1Q8N7H5 531 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 L3HYPDHQ96EM0 354 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 TCF25Q9BQ70 676 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 TRMOQ9BU70 441 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms