RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PTPN5P54829 565 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 AGERQ15109 404 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 TSTD2Q5T7W7 516 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 SEL1L3Q68CR1 1132 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 ZBED8Q8IZ13 594 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 OR4K2Q8NGD2 314 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 LRFN3Q9BTN0 628 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 C6orf106Q9H6K1 298 aaPredicted RBP23.08■■□□□ 1.28
HOMER3-205ENST00000542541 SAYSD1Q9NPB0 183 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 MBD1Q9UIS9 605 aaPredicted RBP23.08■■□□□ 1.28
HOMER3-205ENST00000542541 KCTD3Q9Y597 815 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 TEX264Q9Y6I9 313 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 BUD23O43709 281 aaKnown RBP23.07■■□□□ 1.28
HOMER3-205ENST00000542541 TTC4O95801 387 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 POLBP06746 335 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 PGAM1P18669 254 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 ELK3P41970 407 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 ZNF140P52738 457 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-205ENST00000542541 ZNF284Q2VY69 593 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 SETMARQ53H47 684 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-205ENST00000542541 Q6ZVL8 140 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 TECPR1Q7Z6L1 1165 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 PYROXD1Q8WU10 500 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 FOXJ1Q92949 421 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 PRRX2Q99811 253 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 BPIFA1Q9NP55 256 aa23.07■■□□□ 1.28
HOMER3-205ENST00000542541 NLE1Q9NVX2 485 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-205ENST00000542541 LATO43561 262 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 FSBPO95073 299 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 ETV3P41162 512 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 PPP2CBP62714 309 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 PPP2CAP67775 309 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 SPDYCQ5MJ68 293 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 TMEM135Q86UB9 458 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 AGGF1Q8N302 714 aaeCLIP23.06■■□□□ 1.28
HOMER3-205ENST00000542541 DTD2Q96FN9 168 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 PARD6BQ9BYG5 372 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 FAM83DQ9H4H8 585 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 ZC3H7BQ9UGR2 993 aaKnown RBP23.06■■□□□ 1.28
HOMER3-205ENST00000542541 COQ6Q9Y2Z9 468 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 PCDHGA2Q9Y5H1 932 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 WDFY4Q6ZS81 3184 aa23.06■■□□□ 1.28
HOMER3-205ENST00000542541 METTL12A8MUP2 240 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 C10orf142B7Z368 130 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 BANF1O75531 89 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 PAK4O96013 591 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-205ENST00000542541 PAMP19021 973 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 PSMA3P25788 255 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 MAT2AP31153 395 aaKnown RBP23.05■■□□□ 1.28
HOMER3-205ENST00000542541 VSNL1P62760 191 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 SLMAPQ14BN4 828 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 HP1BP3Q5SSJ5 553 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-205ENST00000542541 ZNF765Q7L2R6 523 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 LPCAT2Q7L5N7 544 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 ZBTB44Q8NCP5 570 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 FBXO36Q8NEA4 188 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 NUS1Q96E22 293 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 DNAJC1Q96KC8 554 aaKnown RBP23.05■■□□□ 1.28
HOMER3-205ENST00000542541 PLEKHG4BQ96PX9 1271 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 APPL1Q9UKG1 709 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 CHMP2BQ9UQN3 213 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 RPS6KL1Q9Y6S9 549 aa23.05■■□□□ 1.28
HOMER3-205ENST00000542541 USP1O94782 785 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 BPIP17213 487 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 SPAM1P38567 509 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 MAGEA4P43358 317 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 DCDC1P59894 354 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 PTPRCAPQ14761 206 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 NLRP8Q86W28 1048 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 RELL1Q8IUW5 271 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 ANKMY2Q8IV38 441 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 PALM2Q8IXS6 379 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 OR13C4Q8NGS5 318 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 BIRC7Q96CA5 298 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 ZNF778Q96MU6 729 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 DUSP15Q9H1R2 295 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-205ENST00000542541 TREX1Q9NSU2 369 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 NFKBIL1Q9UBC1 381 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-205ENST00000542541 DMTF1Q9Y222 760 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-205ENST00000542541 CCDC78A2IDD5 438 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 GOLGA8CPA6NN73 597 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 IGHV4-34P06331 123 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 GM2AP17900 193 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 BCKDHBP21953 392 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 NMBRP28336 390 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 ACVR1Q04771 509 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 LRRC14Q15048 493 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 ANKRD20A4Q4UJ75 823 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 IGDCC3Q8IVU1 814 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 GPR26Q8NDV2 337 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 MYRIPQ8NFW9 859 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 DTX3LQ8TDB6 740 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 KLK6Q92876 244 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 AP2M1Q96CW1 435 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 MFSD3Q96ES6 412 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 CDKN2AIPNLQ96HQ2 116 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 LENG8Q96PV6 779 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-205ENST00000542541 ABCG8Q9H221 673 aa23.04■■□□□ 1.28
HOMER3-205ENST00000542541 RAB21Q9UL25 225 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms