RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 FKTNO75072 461 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 B3GAT3O94766 335 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 EOMESO95936 686 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 AGR2O95994 175 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 GSTM1P09488 218 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 GRK4P32298 578 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 MSX2P35548 267 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TKTL1P51854 596 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 NFE2Q16621 373 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 HIF1AQ16665 826 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ZCCHC23Q6ZST2 131 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SLC24A5Q71RS6 500 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CTU1Q7Z7A3 348 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNF280BQ86YH2 543 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CRLF3Q8IUI8 442 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CPNE9Q8IYJ1 553 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 PYROXD2Q8N2H3 581 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 FAM71DQ8N9W8 422 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 IPMKQ8NFU5 416 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TSPAN14Q8NG11 270 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 OR6C4Q8NGE1 309 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 HASPINQ8TF76 798 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CMTM3Q96MX0 182 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 USB1Q9BQ65 265 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 BTBD2Q9BX70 525 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ULBP1Q9BZM6 244 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SP140LQ9H930 580 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 IL37Q9NZH6 218 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CDH22Q9UJ99 828 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TCRBV7S3A2A0A539 114 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 YJEFN3A6XGL0 299 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 I6L893 689 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 K7EPI3 171 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 COPEO14579 308 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ALOX15BO15296 676 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 DENRO43583 198 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 NBNO60934 754 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 RASGRP1O95267 797 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 KRT6AP02538 564 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 AMHP03971 560 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 KRT6BP04259 564 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SELLP14151 372 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CYP2F1P24903 491 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 PCSK1P29120 753 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 NOS2P35228 1153 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CPOXP36551 454 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SULT1E1P49888 294 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 BCAP31P51572 246 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SSTP61278 116 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SLC10A2Q12908 348 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TCTN1Q2MV58 587 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 DCAF6Q58WW2 860 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 EFHC2Q5JST6 749 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 RARS2Q5T160 578 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 DCLRE1AQ6PJP8 1040 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ANGPTL8Q6UXH0 198 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 STRA8Q7Z7C7 330 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 FAM126BQ8IXS8 530 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 AHI1Q8N157 1196 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 OR10Z1Q8NGY1 313 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 GRIN3AQ8TCU5 1115 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ALKBH8Q96BT7 664 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 THAP11Q96EK4 314 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SMARCD1Q96GM5 515 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ARL5BQ96KC2 179 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CEP19Q96LK0 163 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNF512Q96ME7 567 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CSPG4P5Q96PW8 444 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 RNF38Q9H0F5 515 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 COPS7BQ9H9Q2 264 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 POPDC2Q9HBU9 364 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TMPRSS4Q9NRS4 437 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 BCLAF3A2AJT9 711 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TMEM189-UBE2V1I3L0A0 370 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TOR1BO14657 336 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SCAMP3O14828 347 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TMEM63AO94886 807 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ZBTB11O95625 1053 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 FUCA1P04066 466 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 HEXBP07686 556 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TYMPP19971 482 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ASMTP46597 345 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 FAAP100Q0VG06 881 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SMU1Q2TAY7 513 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 WSCD2Q2TBF2 565 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 NCBP2-AS2Q69YL0 99 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 ELMSAN1Q6PJG2 1045 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 GLRX5Q86SX6 157 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 PSTKQ8IV42 348 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 NUDCD3Q8IVD9 361 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CTAGE3PQ8IX95 158 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TBC1D21Q8IYX1 336 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SIX6OS1Q8N1H7 587 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CRIPAKQ8N1N5 446 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 SCML4Q8N228 414 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 PQLC1Q8N2U9 271 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 CPSF7Q8N684 471 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 FBXO36Q8NEA4 188 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 JADE3Q92613 823 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 E2F7Q96AV8 911 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms