RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 NUS1Q96E22 293 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 PDLIM2Q96JY6 352 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 CDC6Q99741 560 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 TLR10Q9BXR5 811 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 TEX101Q9BY14 249 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 KLHL8Q9P2G9 620 aaPredicted RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 CNOT6Q9ULM6 557 aaKnown RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 RPL26L1Q9UNX3 145 aaKnown RBP9.72□□□□□ -0.85
YBX3-212ENST00000542002 ST14Q9Y5Y6 855 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 U3KQA8 63 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 SHROOM3Q8TF72 1996 aa9.72□□□□□ -0.85
YBX3-212ENST00000542002 PSMD11O00231 422 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 TOR1BO14657 336 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 YY2O15391 372 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 YKT6O15498 198 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 KCNN4O15554 427 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 MTSS1O43312 755 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 HYAL3O43820 417 aaPredicted RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 LDOC1O95751 146 aaPredicted RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 CEACAM5P06731 702 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 TSHRP16473 764 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SPINT3P49223 89 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 HK3P52790 923 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 GDF10P55107 478 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 CLDN6P56747 220 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SRP54P61011 504 aaKnown RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 FOXK2Q01167 660 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 PPARDQ03181 441 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 DPTQ07507 201 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 FOXC1Q12948 553 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 MSLNQ13421 630 aaPredicted RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 ARHGEF7Q14155 803 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 PTK2BQ14289 1009 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 RPS6KA1Q15418 735 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SIX1Q15475 284 aaPredicted RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 SLC14A2Q15849 920 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 PRRT3Q5FWE3 981 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SIRPB2Q5JXA9 342 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 FAXCQ5TGI0 409 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 RD3Q7Z3Z2 195 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 TMC3Q7Z5M5 1100 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 RAB44Q7Z6P3 723 aaPredicted RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 HID1Q8IV36 788 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SFTPA2Q8IWL1 248 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 PHACTR4Q8IZ21 702 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SLC25A41Q8N5S1 370 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 FAM71DQ8N9W8 422 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 CCL4L1Q8NHW4 92 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 LMX1AQ8TE12 382 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 ATG4AQ8WYN0 398 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 PDXPQ96GD0 296 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 CNDP2Q96KP4 475 aaKnown RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 VAT1Q99536 393 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 LRRC61Q9BV99 259 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 RIOK2Q9BVS4 552 aaKnown RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 ADGRE3Q9BY15 652 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 MAGEE1Q9HCI5 957 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 FGF22Q9HCT0 170 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 HAUS2Q9NVX0 235 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 TRHDEQ9UKU6 1024 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 DNPEPQ9ULA0 475 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SHOC2Q9UQ13 582 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 PCYT1BQ9Y5K3 369 aaPredicted RBP9.71□□□□□ -0.86
YBX3-212ENST00000542002 PCNX2A6NKB5 2137 aa9.71□□□□□ -0.86
YBX3-212ENST00000542002 SPTBN2O15020 2390 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 C1orf232A0A0U1RR37 186 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 C5orf60A6NFR6 353 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 ENC1O14682 589 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 CASC3O15234 703 aaKnown RBP9.7□□□□□ -0.86
YBX3-212ENST00000542002 AQP9O43315 295 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 METTL18O95568 372 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 NDST3O95803 873 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 EPOP01588 193 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 ZNF30P17039 623 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 CXCR5P32302 372 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 CA5AP35218 305 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 ADRA1AP35348 466 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 CETN2P41208 172 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 KIAA1024LP59773 190 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 HNRNPKP61978 463 aaKnown RBP eCLIP9.7□□□□□ -0.86
YBX3-212ENST00000542002 CDK3Q00526 305 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 SPARCL1Q14515 664 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 PTPRCAPQ14761 206 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 SLC1A5Q15758 541 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 DEFB133Q30KQ1 61 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 RANBP10Q6VN20 620 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 PRUNE1Q86TP1 453 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 TRIM74Q86UV6 250 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 NLRP8Q86W28 1048 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 HEATR4Q86WZ0 1026 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 SLC13A5Q86YT5 568 aaPredicted RBP9.7□□□□□ -0.86
YBX3-212ENST00000542002 CDKL3Q8IVW4 592 aaPredicted RBP9.7□□□□□ -0.86
YBX3-212ENST00000542002 NDUFAF2Q8N183 169 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 GPR26Q8NDV2 337 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 OR56A4Q8NGH8 313 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 OR4C6Q8NH72 309 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 C1orf54Q8WWF1 131 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 AP2M1Q96CW1 435 aa9.7□□□□□ -0.86
YBX3-212ENST00000542002 APOLD1Q96LR9 279 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms