RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ABTB1Q969K4 478 aaPredicted RBP10.43□□□□□ -0.74
CHFR-219ENST00000541341 C18orf25Q96B23 403 aaPredicted RBP10.43□□□□□ -0.74
CHFR-219ENST00000541341 RMDN1Q96DB5 314 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 TSPAN17Q96FV3 270 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 HSFY1Q96LI6 401 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 TDRD1Q9BXT4 1180 aaKnown RBP10.43□□□□□ -0.74
CHFR-219ENST00000541341 SLC4A5Q9BY07 1137 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 COPS7BQ9H9Q2 264 aaPredicted RBP10.43□□□□□ -0.74
CHFR-219ENST00000541341 SMYD2Q9NRG4 433 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 ATAD3AQ9NVI7 634 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 DPP3Q9NY33 737 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 NXF1Q9UBU9 619 aaKnown RBP10.43□□□□□ -0.74
CHFR-219ENST00000541341 TUBGCP4Q9UGJ1 667 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 SIX4Q9UIU6 781 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 APPL1Q9UKG1 709 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 BLOC1S6Q9UL45 172 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 SIT1Q9Y3P8 196 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
CHFR-219ENST00000541341 PCDHGA4Q9Y5G9 962 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 FADS3Q9Y5Q0 445 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 RPS6KL1Q9Y6S9 549 aa10.43□□□□□ -0.74
CHFR-219ENST00000541341 ZNF638Q14966 1978 aaKnown RBP10.43□□□□□ -0.74
CHFR-219ENST00000541341 RIF1Q5UIP0 2472 aaKnown RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 TCRBV3S1A0A5B6 114 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 MED19A0JLT2 244 aaPredicted RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 WDR27A2RRH5 827 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 SAC3D1A6NKF1 404 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ACOT8O14734 319 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 GIPC1O14908 333 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 AREL1O15033 823 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 VPS4BO75351 444 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 KATNA1O75449 491 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 GPC4O75487 556 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 SRP72O76094 671 aaKnown RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 CALCAP01258 141 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 NTRK1P04629 796 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 GPIP06744 558 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 KRT19P08727 400 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ZNF26P17031 533 aaPredicted RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 TFEBP19484 476 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 MYF6P23409 242 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 SLC5A2P31639 672 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 SLC26A3P40879 764 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 C21orf59P57076 290 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 GRSF1Q12849 480 aaKnown RBP eCLIP10.42□□□□□ -0.74
CHFR-219ENST00000541341 MPP3Q13368 585 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 UBXN2BQ14CS0 331 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 NDUFA5Q16718 116 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 UPP1Q16831 310 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 MGAT5BQ3V5L5 792 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 PPM1LQ5SGD2 360 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 TMTC4Q5T4D3 741 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ARHGAP17Q68EM7 881 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 KLHL35Q6PF15 583 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 LILRA6Q6PI73 481 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ABRAXAS1Q6UWZ7 409 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 RNF111Q6ZNA4 994 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 PRR23BQ6ZRT6 265 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ZCCHC23Q6ZST2 131 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ZNF534Q76KX8 674 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 TMEM135Q86UB9 458 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 TTC30BQ8N4P2 665 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 EMC1Q8N766 993 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 LRRC52Q8N7C0 313 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 TRUB1Q8WWH5 349 aaKnown RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 S100ZQ8WXG8 99 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 EFHD2Q96C19 240 aaPredicted RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 MAELQ96JY0 434 aaKnown RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 ZNF778Q96MU6 729 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 DOK1Q99704 481 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 CLSTN3Q9BQT9 956 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 SNRNP25Q9BV90 132 aaKnown RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 ACE2Q9BYF1 805 aaPredicted RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 C20orf27Q9GZN8 174 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ZNF385DQ9H6B1 395 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 GOLGA2P5Q9HBQ8 144 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 DDX18Q9NVP1 670 aaKnown RBP10.42□□□□□ -0.74
CHFR-219ENST00000541341 TMEM216Q9P0N5 145 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 DPP7Q9UHL4 492 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 STAP1Q9ULZ2 295 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 AP4E1Q9UPM8 1137 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ACOT9Q9Y305 439 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 NDUFAF1Q9Y375 327 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 ZNF292O60281 2723 aa10.42□□□□□ -0.74
CHFR-219ENST00000541341 TRIM64A6NGJ6 449 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 SOBPA7XYQ1 873 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 LYPLA1O75608 230 aaPredicted RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 OR6B1O95007 311 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 NPPAP01160 153 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 ITGB3P05106 788 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 C8AP07357 584 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 RBP1P09455 135 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 SP9P0CG40 484 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 ENO3P13929 434 aaPredicted RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 IL4RP24394 825 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 FASP25445 335 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 PSMA4P25789 261 aaKnown RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 PNPLA4P41247 253 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CLCNKBP51801 687 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 THOP1P52888 689 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms