RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 AKAP7Q9P0M2 348 aaPredicted RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 SEPT3Q9UH03 358 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 LOC101059948A0A1B0GTJ6 334 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 RHPN2P1A8MT19 583 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 PDE2AO00408 941 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 CREB3O43889 395 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 HEXIM1O94992 359 aaKnown RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 DLGAP3O95886 979 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ERCC5P28715 1186 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 OAS2P29728 719 aaKnown RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 ALDH4A1P30038 563 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 SOX5P35711 763 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ADCY8P40145 1251 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 CCR10P46092 362 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 FASLGP48023 281 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 KLK7P49862 253 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 PAPOLAP51003 745 aaKnown RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 RAB15P59190 212 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 AP1S1P61966 158 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 RPL7AP62424 266 aaKnown RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 CDK3Q00526 305 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 MC2RQ01718 297 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 CDC20Q12834 499 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ILF3Q12906 894 aaKnown RBP eCLIP7.29□□□□□ -1.24
YBX3-209ENST00000540747 RFTN1Q14699 578 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 CA9Q16790 459 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 DPCR1Q3MIW9 517 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 NKAIN2Q5VXU1 208 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ANKS6Q68DC2 871 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 CAVIN1Q6NZI2 390 aaKnown RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 TMEM71Q6P5X7 295 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ARHGAP36Q6ZRI8 547 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 TIPARPQ7Z3E1 657 aaKnown RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 HSD11B1LQ7Z5J1 315 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 TECPR1Q7Z6L1 1165 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ZNF354CQ86Y25 554 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 FAM26EQ8N5C1 309 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 IL22RA1Q8N6P7 574 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ARFGAP1Q8N6T3 406 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 C9orf43Q8TAL5 461 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 RTP4Q96DX8 246 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 NUS1Q96E22 293 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 CELF6Q96J87 481 aaKnown RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 MCCC1Q96RQ3 725 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 CNPY3Q9BT09 278 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 ASPSCR1Q9BZE9 553 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 PHPT1Q9NRX4 125 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 ADAM22Q9P0K1 906 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 SUFUQ9UMX1 484 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 SIK3Q9Y2K2 1263 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 TMEM184BQ9Y519 407 aaPredicted RBP7.29□□□□□ -1.24
YBX3-209ENST00000540747 HIVEP3Q5T1R4 2406 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 CRYBG3Q68DQ2 2970 aa7.29□□□□□ -1.24
YBX3-209ENST00000540747 A6NCN8 305 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 NPIPB15A6NHN6 443 aaPredicted RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 ARHGAP42A6NI28 874 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 EIF3CLB5ME19 914 aaKnown RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 PSMD11O00231 422 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 TEX33O43247 280 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 SOCS5O75159 536 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 PALMO75781 387 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 EML2O95834 649 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 CALB1P05937 261 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 MPSTP25325 297 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 EEF1GP26641 437 aaKnown RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 VIPR1P32241 457 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 CSTF2P33240 577 aaKnown RBP eCLIP7.28□□□□□ -1.24
YBX3-209ENST00000540747 ETV3P41162 512 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 NSFP46459 744 aaKnown RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 GNPDA1P46926 289 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 POLD2P49005 469 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 TPI1P60174 286 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 POLR2LP62875 67 aaKnown RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 GPLD1P80108 840 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 DPTQ07507 201 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 BCL2L1Q07817 233 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 IL10RBQ08334 325 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 ABHD18Q0P651 414 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 DPYSQ14117 519 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 ACOX1Q15067 660 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 CAMK4Q16566 473 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 HSP90AA4PQ58FG1 418 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 TCP11X2Q5H9J9 407 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 CFAP58Q5T655 872 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 CDKAL1Q5VV42 579 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 SLC30A9Q6PML9 568 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 WDR74Q6RFH5 385 aaPredicted RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 ADAMTSL4Q6UY14 1074 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 GAS2L3Q86XJ1 694 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 TP53INP2Q8IXH6 220 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 NLGN4XQ8N0W4 816 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 PGBD5Q8N414 524 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 SFRP1Q8N474 314 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 CCDC112Q8NEF3 446 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 NLGN4YQ8NFZ3 816 aaPredicted RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 ABHD17AQ96GS6 310 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 MCEEQ96PE7 176 aa7.28□□□□□ -1.24
YBX3-209ENST00000540747 TEFMQ96QE5 360 aaKnown RBP7.28□□□□□ -1.24
YBX3-209ENST00000540747 PEBP4Q96S96 227 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms