RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 SPRED1Q7Z699 444 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 CCL4L1Q8NHW4 92 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 CPLX3Q8WVH0 158 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 FATE1Q969F0 183 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 POLR1EQ9GZS1 481 aaKnown RBP16.7■□□□□ 0.26
PSMD3-204ENST00000540504 CARS2Q9HA77 564 aaKnown RBP16.7■□□□□ 0.26
PSMD3-204ENST00000540504 NT5MQ9NPB1 228 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.7■□□□□ 0.26
PSMD3-204ENST00000540504 LCMT1Q9UIC8 334 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 ACSL6Q9UKU0 697 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 RNF215Q9Y6U7 377 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 UNC13CQ8NB66 2214 aa16.7■□□□□ 0.26
PSMD3-204ENST00000540504 ARHGEF17Q96PE2 2063 aaPredicted RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 PMS2P1A4D2B8 440 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 K7ENP7 123 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 FZD6O60353 706 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 CEACAM5P06731 702 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 ZNF30P17039 623 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 SSR1P43307 286 aaKnown RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 ARSEP51690 589 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 ZFP36L1Q07352 338 aaKnown RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 GALNT2Q10471 571 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 PDK2Q15119 407 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 CLPPQ16740 277 aaPredicted RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 TAF1BQ53T94 588 aaPredicted RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 ALG1LQ6GMV1 187 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 RAET1GQ6H3X3 334 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 INO80CQ6PI98 192 aaPredicted RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 TECPR1Q7Z6L1 1165 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 NLRP8Q86W28 1048 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 C17orf82Q86X59 251 aaPredicted RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 MAP7D3Q8IWC1 876 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 RAVER1Q8IY67 606 aaKnown RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 Q8N9G6 341 aaPredicted RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 ZNF564Q8TBZ8 553 aaPredicted RBP16.69■□□□□ 0.26
PSMD3-204ENST00000540504 PIH1D2Q8WWB5 315 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 MAML1Q92585 1016 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 SEMA3CQ99985 751 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 ZNF670Q9BS34 389 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 FOXP3Q9BZS1 431 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 DNPEPQ9ULA0 475 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 SLC17A4Q9Y2C5 497 aa16.69■□□□□ 0.26
PSMD3-204ENST00000540504 MGAQ8IWI9 3026 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 SCN8AQ9UQD0 1980 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 MATN3O15232 486 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 NVLO15381 856 aaKnown RBP16.68■□□□□ 0.26
PSMD3-204ENST00000540504 MFSD11O43934 449 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 C1QL1O75973 258 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 PRB1P04280 392 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 GYPCP04921 128 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 PYGLP06737 847 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 IVLP07476 585 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 CD48P09326 243 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 JMJD7P0C870 316 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 CA4P22748 312 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 CCNCP24863 283 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 SLC5A2P31639 672 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 ITKQ08881 620 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 MMRN1Q13201 1228 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 CLN3Q13286 438 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 DPYSL3Q14195 570 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 IFI16Q16666 785 aaKnown RBP16.68■□□□□ 0.26
PSMD3-204ENST00000540504 NCBP2-AS2Q69YL0 99 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 PCSK4Q6UW60 755 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 TSPAN33Q86UF1 283 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 NRROSQ86YC3 692 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 ZDHHC1Q8WTX9 485 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 TSGA13Q96PP4 275 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 CMKLR1Q99788 373 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 SUFUQ9UMX1 484 aa16.68■□□□□ 0.26
PSMD3-204ENST00000540504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■□□□ 12.5
PSMD3-204ENST00000540504 A0A0J9YYE9 177 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 GOLGA6CA6NDK9 693 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 GOLGA6BA6NDN3 693 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 PROSCO94903 275 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 TRBC1P01850 177 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 FUCA1P04066 466 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 FGF1P05230 155 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 TPM3P06753 285 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 PDHA1P08559 390 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 KRT7P08729 469 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 H2AFZP0C0S5 128 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 GOLGA6DP0CG33 693 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 CTPS1P17812 591 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 HNRNPH3P31942 346 aaKnown RBP16.67■□□□□ 0.26
PSMD3-204ENST00000540504 GPR1P46091 355 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 GNPDA1P46926 289 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 EPHB1P54762 984 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 B4GALNT1Q00973 533 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 CFHR1Q03591 330 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 NR1D2Q14995 579 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 ANKRD20A8PQ5CZ79 823 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 CCDC81Q6ZN84 652 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 H2AFVQ71UI9 128 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 ZNF765Q7L2R6 523 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 ZNF438Q7Z4V0 828 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 SLITRK4Q8IW52 837 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 KCTD6Q8NC69 237 aa16.67■□□□□ 0.26
PSMD3-204ENST00000540504 AP2M1Q96CW1 435 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms