RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 POLR2EP19388 210 aaKnown RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 MC4RP32245 332 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 SLC8A1P32418 973 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 PTGER3P43115 390 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 LIG3P49916 1009 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 NAA20P61599 178 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 POLR2LP62875 67 aaKnown RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 CSHL1Q14406 222 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 CARD16Q5EG05 197 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 ZNF789Q5FWF6 425 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 LY6G5CQ5SRR4 150 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 USP45Q70EL2 814 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 CAMK1DQ8IU85 385 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 HEXDCQ8WVB3 486 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 LPGAT1Q92604 370 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 ILKAPQ9H0C8 392 aaPredicted RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 MYLK2Q9H1R3 596 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 ZFYVE1Q9HBF4 777 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 DNAJC28Q9NX36 388 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 NCKIPSDQ9NZQ3 722 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 HEY2Q9UBP5 337 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 MSRAQ9UJ68 235 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 DNAJC16Q9Y2G8 782 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 PCDHB1Q9Y5F3 818 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 CAPN7Q9Y6W3 813 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 WASH3PC4AMC7 463 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 ANKRD65E5RJM6 399 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 TK2O00142 265 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 CCL22O00626 93 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 PER2O15055 1255 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 HOXC11O43248 304 aaPredicted RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 BUD23O43709 281 aaKnown RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 CCDC166P0CW27 439 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 NTHL1P78549 312 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 PRKAA1Q13131 559 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 PDAP1Q13442 181 aaKnown RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 RCN2Q14257 317 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 TECRLQ5HYJ1 363 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 DGKKQ5KSL6 1271 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 C9orf50Q5SZB4 431 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 UGT3A1Q6NUS8 523 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 CLNKQ7Z7G1 428 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 RYBPQ8N488 228 aaPredicted RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 RHEBL1Q8TAI7 183 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 SKA1Q96BD8 255 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 ECHDC3Q96DC8 303 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 SUV39H2Q9H5I1 410 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 ECT2Q9H8V3 914 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 CPSF2Q9P2I0 782 aaKnown RBP17.13■□□□□ 0.33
LTBR-207ENST00000539925 HAO1Q9UJM8 370 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 FBXO10Q9UK96 956 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 CRYL1Q9Y2S2 319 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
LTBR-207ENST00000539925 ZNF821O75541 412 aaPredicted RBP17.12■□□□□ 0.33
LTBR-207ENST00000539925 SRP72O76094 671 aaKnown RBP17.12■□□□□ 0.33
LTBR-207ENST00000539925 ESR1P03372 595 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 F7P08709 466 aaPredicted RBP17.12■□□□□ 0.33
LTBR-207ENST00000539925 AQP5P55064 265 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 ATP6V0D1P61421 351 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 PFKPQ01813 784 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 KRT72Q14CN4 511 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 SHHQ15465 462 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 GRAMD4Q6IC98 578 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 MTDHQ86UE4 582 aaKnown RBP17.12■□□□□ 0.33
LTBR-207ENST00000539925 NKAPQ8N5F7 415 aaKnown RBP17.12■□□□□ 0.33
LTBR-207ENST00000539925 OSCP1Q8WVF1 389 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 LRIG1Q96JA1 1093 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 CNDP1Q96KN2 507 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 TRMOQ9BU70 441 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 GATA5Q9BWX5 397 aaPredicted RBP17.12■□□□□ 0.33
LTBR-207ENST00000539925 VTI1BQ9UEU0 232 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 FKBPLQ9UIM3 349 aa17.12■□□□□ 0.33
LTBR-207ENST00000539925 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.11■□□□□ 0.33
LTBR-207ENST00000539925 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.11■□□□□ 0.33
LTBR-207ENST00000539925 UBA6A0AVT1 1052 aaPredicted RBP17.11■□□□□ 0.33
LTBR-207ENST00000539925 GRXCR1A8MXD5 290 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 H3BMM5 538 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 VPS26AO75436 327 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 SRPRAP08240 638 aaKnown RBP17.11■□□□□ 0.33
LTBR-207ENST00000539925 ITGALP20701 1170 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 GLRBP48167 497 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 CDKN2DP55273 166 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 PTPRCAPQ14761 206 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 GPR33Q49SQ1 333 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 ZRANB3Q5FWF4 1079 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 CFAP157Q5JU67 520 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 ZNF697Q5TEC3 545 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 CES4AQ5XG92 561 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 AFAP1L2Q8N4X5 818 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 INPP5DQ92835 1189 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 SCRN2Q96FV2 425 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 SORT1Q99523 831 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 TFB2MQ9H5Q4 396 aaKnown RBP17.11■□□□□ 0.33
LTBR-207ENST00000539925 DUS2Q9NX74 493 aaKnown RBP17.11■□□□□ 0.33
LTBR-207ENST00000539925 GDE1Q9NZC3 331 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 TMCO1Q9UM00 188 aa17.11■□□□□ 0.33
LTBR-207ENST00000539925 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms