RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 RBM38Q9H0Z9 239 aaKnown RBP11.96□□□□□ -0.49
CPNE8-203ENST00000538596 TUBB1Q9H4B7 451 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 TMEM248Q9NWD8 314 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 IKZF3Q9UKT9 509 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.96□□□□□ -0.49
CPNE8-203ENST00000538596 FAM149AA5PLN7 773 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 H3BSA7 217 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 NME4O00746 187 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 CD3EAPO15446 510 aaKnown RBP11.96□□□□□ -0.5
CPNE8-203ENST00000538596 PAPSS2O95340 614 aaPredicted RBP11.96□□□□□ -0.5
CPNE8-203ENST00000538596 LINC00032P0C843 101 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 MTHFD2P13995 350 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 CAPN3P20807 821 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 PCSK6P29122 969 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 APLP1P51693 650 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 NDST2P52849 883 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 APOFQ13790 326 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 C8orf82Q6P1X6 216 aaPredicted RBP11.96□□□□□ -0.5
CPNE8-203ENST00000538596 MON1AQ86VX9 555 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 NUP93Q8N1F7 819 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 CFAP52Q8N1V2 620 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 TMIGD2Q96BF3 282 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 L3HYPDHQ96EM0 354 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 RPRD1AQ96P16 312 aaPredicted RBP11.96□□□□□ -0.5
CPNE8-203ENST00000538596 EPB41L1Q9H4G0 881 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.96□□□□□ -0.5
CPNE8-203ENST00000538596 NOD1Q9Y239 953 aa11.96□□□□□ -0.5
CPNE8-203ENST00000538596 ARHGEF37A1IGU5 675 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 SOCS2O14508 198 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 TPST1O60507 370 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 FDXRP22570 491 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 ARPP19P56211 112 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 IRF5Q13568 498 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 POLD3Q15054 466 aaPredicted RBP11.95□□□□□ -0.5
CPNE8-203ENST00000538596 DHFR2Q86XF0 187 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 LRRC49Q8IUZ0 686 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 TWIST2Q8WVJ9 160 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 ZNF597Q96LX8 424 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 TMEM79Q9BSE2 394 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 TRMT13Q9NUP7 481 aaKnown RBP11.95□□□□□ -0.5
CPNE8-203ENST00000538596 SCML2Q9UQR0 700 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 FAM50BQ9Y247 325 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 SLC27A5Q9Y2P5 690 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 CROCCQ5TZA2 2017 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 LOC285095A0A1B0GVY8 99 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 SAC3D1A6NKF1 404 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 AKAP10O43572 662 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 GLP2RO95838 553 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 SLC7A1P30825 629 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 STX1BP61266 288 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 NRG1Q02297 640 aaPredicted RBP11.95□□□□□ -0.5
CPNE8-203ENST00000538596 GALNT1Q10472 559 aaPredicted RBP11.95□□□□□ -0.5
CPNE8-203ENST00000538596 SAMD4BQ5PRF9 694 aaKnown RBP11.95□□□□□ -0.5
CPNE8-203ENST00000538596 MSANTD2Q6P1R3 559 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 SPPL2CQ8IUH8 684 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 CLYBLQ8N0X4 340 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 NSMCE3Q96MG7 304 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 CAAP1Q9H8G2 361 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 AURKCQ9UQB9 309 aa11.95□□□□□ -0.5
CPNE8-203ENST00000538596 A0A0D9SEW6 157 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 UBA6A0AVT1 1052 aaPredicted RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 NCF1BA6NI72 391 aaPredicted RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 NCF1CA8MVU1 366 aaPredicted RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 PDLIM1O00151 329 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 RAMP2O60895 175 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 IGHA2P01877 340 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 NCF1P14598 390 aaPredicted RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 ZNF37AP17032 561 aaPredicted RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 CES1P23141 567 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 OR1E1P30953 314 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 OR1G1P47890 313 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 HSPA13P48723 471 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 FAM45BPQ6NSW5 357 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 TEX26Q8N6G2 289 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 FAM45AQ8TCE6 357 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 SEMA4BQ9NPR2 832 aaPredicted RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 ETAA1Q9NY74 926 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 TIMM22Q9Y584 194 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 A0A0U1RQS6 177 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 ASGR1P07306 291 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 GFAPP14136 432 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 TYMPP19971 482 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 PRDX3P30048 256 aaKnown RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 DIO3P55073 304 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 CDH15P55291 814 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 PRKCQQ04759 706 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 TRAP1Q12931 704 aaKnown RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 C10orf120Q5SQS8 335 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 SCIMPQ6UWF3 145 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 C17orf99Q6UX52 265 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 ESAMQ96AP7 390 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 TUBGCP3Q96CW5 907 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 EXOC2Q96KP1 924 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 ZFRQ96KR1 1074 aaKnown RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 NDUFA13Q9P0J0 144 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 GALPQ9UBC7 116 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 CNOT11Q9UKZ1 510 aaKnown RBP11.94□□□□□ -0.5
CPNE8-203ENST00000538596 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
CPNE8-203ENST00000538596 FNDC3AQ9Y2H6 1198 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms